Lacinutrix neustonica: N7U66_16610
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Entry
N7U66_16610 CDS
T09391
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lnu
Lacinutrix neustonica
Brite
KEGG Orthology (KO) [BR:
lnu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lnu03032
]
N7U66_16610 (topA)
03400 DNA repair and recombination proteins [BR:
lnu03400
]
N7U66_16610 (topA)
Enzymes [BR:
lnu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
N7U66_16610 (topA)
DNA replication proteins [BR:
lnu03032
]
Prokaryotic type
DNA Topoisomerases
N7U66_16610 (topA)
DNA repair and recombination proteins [BR:
lnu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
N7U66_16610 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
RP-C
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WAC01564
UniProt:
A0A9E8SDT5
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All DBs
Position
3070357..3072882
Genome browser
AA seq
841 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKFLGKDFKVESSYGHISDLPSKELGVDVEGDFDPKYEVSTDK
KAVVKKLKDLAKKAEMVWLASDEDREGEAIAWHLAESLGLDKNKTKRIVFHEITKSAIQK
AVENPRQIDYDLVDAQQARRVLDRIVGYELSPVLWRKVKGGLSAGRVQSVSVRLIVERER
EINEFEPEASYRIDAEFSNEDGQSFKAKLPKTIKTKAQALKFLEQNANTTFKVFDLEKKP
AKKAPAAPFTTSTLQQEASRKLYFSVSKTMNMAQRLYEAGLITYMRTDSVNLSDEARKGA
EKEITEAYGKAYSKERKYKGKSKGAQEAHEAIRPTDFSVHSVDLERDQTRLYDLIWKRAI
ASQMSEAKLERTNVKIKAAAHNDIFTANGEVITFDGFLKVYLEGTDDEDVEQEGMLPAMK
VNEALLNNYITATERYSRPPYRYTEASLVKKLEELGIGRPSTYAPTISTIQNRKYVEKGT
IDGKEREYTQLVLKNDKVKDTLLTEKVGSDKGKLVPTDIGMIVTDFLVNHFESILDYSFT
ANVEDQFDDIAEGKANWKTVMKSFYKDFHPKVVDVQENAERESGERILGEDPKSGKRVSV
RLGKFGPMVQMGTVDDEDKPTFASLGPEQQLGSITFEEAMDLFKLPKALGEYKGEPIEVN
NGRFGPYVKFGKKFISLAPGQDPLSIEKEEAIELIKEKEIADAPIYTYKGEGVTKGKGRF
GPFIKWDGMFINVNKKYDWDNLSEKDIIELIETKIQKEIDKVIHNWEEEGIRVEKARWGR
HNILQGKVKIELPKTVDAVALTLDEVKGIIEKNAPKKKAAKKKPAAKKKPTAKKKTVAKK
K
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaatttagtaatagttgagtcacctgcaaaggctaaaacaattgagaaattt
ttaggaaaagactttaaagtggaatcaagttatgggcatatttccgacttgccttccaaa
gaattaggtgtagatgttgaaggtgatttcgatccaaaatatgaagtttctacagataaa
aaagcagtcgttaaaaagctgaaagatttagctaagaaagcagaaatggtttggttagct
agtgatgaagatagagaaggagaagctattgcgtggcatttggcagaatcattagggctg
gacaaaaataagacaaaacggattgtatttcatgagattacaaaatcggctattcagaaa
gcggtagagaacccaagacaaattgattacgatttagtcgatgcacagcaagcgcgtcgt
gtattagatagaattgtaggctacgaattatcccctgtattatggcgtaaagtaaaaggt
ggattgtctgcaggacgtgtgcaatctgtttctgtgcgcttaatcgtagagcgtgaacgt
gaaataaatgaatttgaacccgaagcgtcttatagaattgatgctgaattttcaaatgag
gacggacagtcttttaaagcaaagctgcctaaaacgattaaaacgaaagcacaagcttta
aaattcttagagcaaaatgcgaataccacatttaaggttttcgatttagaaaagaagcca
gctaaaaaggcacctgccgcaccatttacaacctctacattacagcaggaagcgtcacgt
aaactctatttttctgtaagtaaaaccatgaatatggctcagcgtttatacgaagctggt
ttgatcacttacatgagaaccgatagcgtaaacttaagtgatgaagctcgaaaaggtgcc
gaaaaagaaatcacagaagcttatggtaaagcctattcaaaagaacgaaaatataaaggt
aaatctaaaggcgctcaggaagcccatgaggccattcgtcctacagacttttccgtgcac
tctgtagatttagagcgtgatcaaacaaggttatacgatttaatttggaaacgcgccatt
gcctcacaaatgagtgaagcaaaattggaacgtactaatgtgaaaattaaagcagcagca
cataatgatatcttcacggctaatggagaggttatcacttttgatgggtttttaaaagtg
tatttagaaggtaccgatgatgaggatgtggagcaggaaggcatgttgccagcaatgaaa
gtaaatgaagccttgcttaataattacattaccgcaacagagcgttattcaagaccacct
tatagatatacagaagcttctttggttaaaaaattagaagagctaggtattgggcgaccg
tctacttacgctccaacaatttctacaattcagaatagaaagtatgttgaaaaaggaacc
attgatggtaaagaacgtgaatacacacagctagttttaaaaaatgataaagtaaaagat
accctgcttaccgaaaaagtaggttccgataaaggtaagcttgtgcctacagatattgga
atgattgtgacagattttttagtgaatcattttgaaagtattttggattatagttttact
gcaaatgtagaggatcagtttgatgatattgcagaaggtaaagccaattggaagacggtt
atgaaatcattttataaagactttcacccaaaagttgttgatgtacaagaaaatgctgaa
cgcgaatccggagagcgtattttaggggaggatccaaaatcaggaaaacgagtgagtgtc
cgattaggaaaatttggacctatggttcaaatggggacggttgatgacgaagacaaacct
acctttgcgagtttagggccggagcaacaattgggaagtattacttttgaagaggctatg
gatctgtttaaacttcctaaagcgttaggggaatacaaaggggagccaatagaggtgaat
aatggccgatttggaccttatgtgaaatttggaaagaaatttatttctttagcgccagga
caagatcctttaagtatagaaaaagaggaagctattgaattgattaaagaaaaagaaatt
gcagatgcacctatttatacctataaaggggaaggtgttaccaaaggcaaaggacgtttc
ggtccctttattaaatgggatggcatgtttataaatgtgaataagaaatacgattgggac
aatttatctgaaaaggatattattgaattgattgaaaccaagattcagaaagagatagat
aaggttattcataattgggaagaagaaggcattcgcgtggagaaagcccgttggggaaga
cataatattttgcaaggtaaggtgaaaatagagttgcctaaaacagtagatgcggtagca
ttgactcttgacgaagtaaaggggattatagaaaagaatgcgcctaagaaaaaggctgct
aagaaaaaaccggcagctaaaaagaaaccaacggctaaaaagaaaacggtagctaaaaag
aaataa
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