Lacinutrix neustonica: N7U66_20890
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Entry
N7U66_20890 CDS
T09391
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
lnu
Lacinutrix neustonica
Pathway
lnu03030
DNA replication
lnu03430
Mismatch repair
lnu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lnu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
N7U66_20890 (holA)
03430 Mismatch repair
N7U66_20890 (holA)
03440 Homologous recombination
N7U66_20890 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lnu03032
]
N7U66_20890 (holA)
03400 DNA repair and recombination proteins [BR:
lnu03400
]
N7U66_20890 (holA)
Enzymes [BR:
lnu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
N7U66_20890 (holA)
DNA replication proteins [BR:
lnu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
N7U66_20890 (holA)
DNA repair and recombination proteins [BR:
lnu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
N7U66_20890 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_delta2
HP_1247_M
Herpes_UL7
Motif
Other DBs
NCBI-ProteinID:
WAC02186
UniProt:
A0A9E8MVL7
LinkDB
All DBs
Position
3851734..3852738
Genome browser
AA seq
334 aa
AA seq
DB search
MEEVKQLVTDIKNKNLKPIYLLMGEEAYYIDKISDFIEDNVLAEEEKGFNQMVLYGRDVT
IEDIVGHAKRFPMMADKQVVIVKEAQDLARTIDKLASYAENPQPSTVLVLCYKYKSVDKR
KAVYKKIKKTGVVFESKKLYDNQVPDWIRRTLSTKGYKIAPKASQMLVEFLGTDLSKINN
ELEKLQIILPEGTEITPLHIEENIGISKDYNNFELRKAIGARDDAKAFKIVNYFGENPKD
NPMVVTVSLLFNFFSQLLQLHGMTDKSPRSVAAALRVNPYFVNEYLEAARNFPMRKVSGV
IGTLREFDVRGKGVNSNVVPQKDLLKEMLVRILN
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
ttggaagaagtcaaacaactggttacagacataaaaaataaaaatctgaagcccatatat
ttattaatgggagaagaagcctattacattgataagatctcagattttattgaggataac
gtattggcagaagaagaaaaagggtttaaccaaatggtgttgtacggaagagatgttact
attgaggacattgtgggtcatgcgaagcgctttccaatgatggcagacaagcaggtggtg
attgtaaaagaagcacaagacttggctagaactatagataaattagccagttatgccgaa
aatccacagccatctacggttttagttctttgttataaatataaaagtgttgacaagcgt
aaagcggtttataaaaagattaagaaaaccggggttgttttcgaaagcaaaaaactatat
gataaccaagttcccgattggattcggagaaccttatctacaaaaggctataaaattgca
cccaaagcctcacaaatgttggtcgagtttttaggtaccgatttaagtaaaataaataat
gaattagaaaagcttcaaattatattgcccgaaggcaccgaaattacaccgctacatatt
gaagaaaatatagggattagtaaagattataacaactttgaacttcgtaaagcgattggg
gcccgagatgatgctaaagcgtttaaaatcgtgaattattttggtgagaatccaaaagac
aatccaatggtggttaccgtctctttattgtttaattttttctctcaattgttacaattg
catggcatgacggataaatctccaagaagtgtcgctgctgcactgcgtgtaaatccgtat
tttgttaatgaatatcttgaagctgctcgcaattttcccatgcgaaaggtgagtggtgtt
ataggtacgcttcgtgaatttgatgttagggggaagggtgtgaattctaatgtggtgcca
cagaaagatttattaaaagagatgttggttagaattctaaattaa
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