Paenilisteria newyorkensis: OTR81_03045
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Entry
OTR81_03045 CDS
T08875
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lnw
Paenilisteria newyorkensis
Pathway
lnw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lnw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OTR81_03045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lnw03021
]
OTR81_03045
03400 DNA repair and recombination proteins [BR:
lnw03400
]
OTR81_03045
Enzymes [BR:
lnw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OTR81_03045
Transcription machinery [BR:
lnw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OTR81_03045
DNA repair and recombination proteins [BR:
lnw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OTR81_03045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WAO22281
LinkDB
All DBs
Position
1810010..1810954
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETIEISDDAKYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSIQIDG
ALHEFSVIEGVVEDVTSMILNIKKLALKVYAEDDKTLEIDMQGPGVVTAGDINYDSDVEI
LNPDLHICTLSDNAKFHVRLNAARGRGYTPADQNKRENMPIGVLPVDSIFSPVIRVNYQV
ETTRVGQSTNYDKLTFDVLTDGSISPEEAVSLGAKILTEHLNIFVDLTDEAQKAEIMIEK
EESHKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELADKSEDDMMKVRNLGRKSLEEVK
VKLSDLGLGLRNEN
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaattgaaaaaccgaaaatcgagacgattgagatcagcgatgatgccaagtat
ggaaagtttgttgtagagccactagagcgtggatatggtacaactttgggtaactcctta
cgtcgtattctgttatcttctcttcctggtgctgcagtgacatctatccaaatcgatgga
gcgttacatgagttttctgtaatcgaaggtgtagtagaagatgtaacaagcatgattttg
aatatcaagaaacttgcgcttaaagtgtatgccgaagatgacaaaactttggaaattgat
atgcaaggtcctggggtagtaactgccggcgatattaactatgatagcgatgttgagatt
ctgaatccagatcttcatatttgtacacttagtgataacgcgaaattccatgttcgcttg
aatgcggcgcgtggtcgtggttatacacctgcggatcaaaacaaacgtgagaatatgcca
atcggtgtgttgccagttgattcgatttttagcccggttatccgtgttaactatcaagtg
gaaacaacacgtgttggacaatccacaaattatgataagctaacttttgacgttttaacg
gatggaagtattagccctgaagaagctgtttccttgggagcaaaaattcttacagagcat
ttgaatatttttgttgatttaacggatgaagcccaaaaagcggaaatcatgattgaaaaa
gaagaaagccataaagagaaagtgcttgagatgacaattgaagaattggacttatctgtt
cgttcttacaactgtttgaaacgcgctggaatcaatacagtacaggaattagctgacaaa
tctgaggatgatatgatgaaagttcgtaacttgggtcgtaaatctttagaagaagtaaaa
gtgaaactgtctgatcttggcttaggtttacgaaacgaaaattaa
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