Listeria newyorkensis: OTR81_05120
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Entry
OTR81_05120 CDS
T08875
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lnw
Listeria newyorkensis
Brite
KEGG Orthology (KO) [BR:
lnw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lnw03032
]
OTR81_05120 (gyrA)
03400 DNA repair and recombination proteins [BR:
lnw03400
]
OTR81_05120 (gyrA)
Enzymes [BR:
lnw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
OTR81_05120 (gyrA)
DNA replication proteins [BR:
lnw03032
]
Prokaryotic type
DNA Topoisomerases
OTR81_05120 (gyrA)
DNA repair and recombination proteins [BR:
lnw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OTR81_05120 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Retrotran_gag_2
Motif
Other DBs
NCBI-ProteinID:
WAO22655
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Position
1355519..1358032
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AA seq
837 aa
AA seq
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MSETPESRVTEINLNKEMRTSFLDYAMSVIVARALPDVRDGLKPVHRRILYAMNDLGMTS
DKAYKKSARIVGEVIGKYHPHGDTAVYFTMVRMAQDFSYRNMLVDGHGNFGSVDGDMAAA
MRYTEARMSKISMELLRDINKDTIDYVDNYDGSEREPNILPARFPNLLVNGSSGIAVGMA
TNIPTHHLGEVIDGVLALSNNPDIEIRELMEYIPGPDFPTAGMIMGRSGIRRAYETGRGS
ITLRARVEIETKSNGKETIVITELPYQVNKARLLERIAELAREKKIDGITSANDESDRTG
MRMVIEVRRDVSASVIINNLYKMTALQTTFGINMLALVANHPKVLNLKEILYHYLEHQKI
VIRRRTEFELRKAEARAHILEGLRIALDNIDAVIKLIRASKTADVAKEGLMTQFNLSDKQ
AQAILDMRLQRLTGLERDKIEDEFNSLMALITDLKAILGDDERILEIIREELTEIKEKYA
DKRRTEILAGDLVSLEDEDLIPEEEVAITLTNKGYIKRLPLSTYRSQRRGGRGVQGMGTH
EDDFVEHLVATSTHDTLLFFTNTGKVYRAKGYEIPEYSRTAKGIPIINLLGIESQEKVNA
VINLRDFTDDQYLFFTTKLGVVKRSTLTQFAKIRQSGLRAVELRENDELISVQMTDGSKK
IIIGTKFGQSIYFEETDIRVMGRTAAGVRGIRLREDDEVVGMEILEDDEKVLVVTENGYG
KQTLAAQYPLRNRGGMGVKTINITEKNGNLVALKTVTGEEDLMLMTIGGVLIRFSVGDIS
QTGRSAMGVKLIRLDDDEFVATVAKVPKEEEEEFVDEEVSENETVVSEESEDDTTEN
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaacaccagagtcaagagtgacggaaatcaatttgaataaagagatgcgtact
tcttttctagattatgcgatgagtgttattgtggctcgggctcttccagatgttagagat
ggcttgaaacctgtgcatcgtcggattttgtatgcgatgaatgatcttggtatgacgtct
gataaggcttataagaaatcggcgcgtattgtcggtgaagttatcggtaagtatcatccg
catggtgatacggcggtttatttcacgatggttcggatggcgcaggattttagttatcgg
aatatgcttgttgatgggcacggtaactttggttcggtcgatggggatatggcggctgcg
atgcgttatacggaagctagaatgtccaaaatttcgatggagcttttgcgtgatattaat
aaagatacgattgattatgttgataactatgatggttcggaacgtgagcctaatattttg
ccagctcgttttcctaacttgcttgtcaatggttcgtctgggattgcggttgggatggcg
acaaatattccaacgcatcatcttggtgaggttattgacggtgtgcttgcgctgagtaac
aatcctgatatcgagattcgtgagttgatggaatatattcctggtcctgatttccctact
gctgggatgattatgggtcgttctggaattcgtcgtgcttatgaaacgggtcgtggttct
atcacgcttcgtgctcgtgtagagattgaaacgaagagtaatggtaaagagacaatcgtt
attacggagctgccgtatcaagttaataaggcgcgtctacttgagcgtattgctgaactt
gctcgtgagaaaaaaattgatggtattacatctgccaatgatgagtctgaccgtacaggt
atgcgtatggtaatcgaggttcgtcgtgatgtgagtgccagcgttattattaataacttg
tataaaatgacagctctccaaaccacttttgggattaatatgttggcacttgttgcgaat
catccgaaagtgctgaatttgaaagagattttatatcattatttagagcatcaaaaaatc
gttattcgtcgccgtacggaattcgaactgcgtaaagcggaggctcgcgcgcatattcta
gaaggtttacggatcgcgcttgataatatcgatgcagttataaaattaattcgagcttcg
aaaacagcggatgttgccaaagaaggcttgatgacacaatttaacctttctgataaacaa
gcgcaagcgattttggatatgcgtttgcaacgtttaacaggtttggaacgcgacaaaatc
gaggatgaatttaacagtttgatggctctgattacggacttgaaagcaattttaggcgat
gatgagcgtattttagaaattattcgtgaagaattgacagagattaaagagaaatatgcg
gacaaacgccgtacggaaattttggcgggtgatttggtaagcttggaagatgaggatcta
attccagaagaggaagttgcgattacgcttacgaataaaggctatatcaagcgtctgccg
ctttcgacttatcgtagtcagcgccgtggtggccgtggtgtgcaaggaatgggcacgcat
gaagatgatttcgtagagcatcttgtagctacgagtacgcatgatacgctgctattcttt
acgaatactgggaaagtttaccgtgcaaaagggtatgaaattcctgagtatagccgtact
gcgaaagggattccgattatcaacttgcttggcatcgagagccaggaaaaagtaaatgcc
gtgattaatctgcgcgactttacggatgatcagtatctattctttacaacgaaacttggc
gtcgtgaagcgtagtacgttgacacaattcgcgaagattcgtcaaagtggtttgcgagcc
gtggaacttcgtgaaaatgatgagttgatttctgtgcaaatgacggatggcagtaagaaa
atcattattggaacgaaatttggccaatcgatttactttgaggagactgatattcgtgtc
atgggtcgtacagcggctggtgtgcgtggtattcgccttcgtgaagatgatgaggttgtc
ggcatggaaatcctagaagacgacgagaaagtgcttgtcgtgacggagaacggttatggg
aagcaaacgctagctgctcagtatccgcttcgtaatcgtggcggtatgggcgttaaaacc
atcaatatcacagagaaaaacggaaatcttgtcgctctgaaaaccgtcactggtgaagaa
gacttaatgctgatgactattggtggcgttctgatcaggttctcagtcggcgatatttct
caaactggccgtagcgcgatgggcgtgaaactgattcgtctagatgatgatgaatttgta
gcaaccgttgcgaaagtgccgaaagaagaagaggaagagtttgtggacgaagaagtatcc
gaaaacgaaacagtagtgagtgaagagtctgaggacgatactactgaaaactaa
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