Listeria newyorkensis: OTR81_05225
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Entry
OTR81_05225 CDS
T08875
Name
(GenBank) glycoside hydrolase family 43 protein
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
lnw
Listeria newyorkensis
Pathway
lnw00520
Amino sugar and nucleotide sugar metabolism
lnw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lnw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
OTR81_05225
Enzymes [BR:
lnw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
OTR81_05225
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GFIT
Motif
Pfam:
Glyco_hydro_43
GH43_C2
DUF1349
Motif
Other DBs
NCBI-ProteinID:
WAO22676
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Position
complement(1330705..1332324)
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AA seq
539 aa
AA seq
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MQIENPVLKGFNADPSIIRVEDTYYIANSTFEWFPGVQIHESKDLVHWQLIGHPLTTTTL
LDMKGNKDSGGIWAPDLSYADGKFWLVYTDVKTTEGAFKDATNYLTTAENIRGPWTDPIK
LNGVGFDASLFHDDDGKKYLVQMEWDHREYRHPFNGIKLTEYSPELGRLLPETGRIIYHG
TDVKLVEGPHIYKLFGQYYLFCAEGGTVYTHQEVVARSKELFGPYETQPGDVFLTAFDSP
GNYLQKNGHGALVETPSGEWYFAHLTGRPWHHETESSHDPRGWCTLGRETAIQKVAWDED
KWPHIVGGKQGSRFVEAPKDVTPHVYPLTYDEKDDFDEPQLNLNFNTLRVPFDDRMGSLS
VNPGHLRLIGKGSLTNEHELSLVARRWQAFHFEAETALKYEPTTFQQMAGLVNYYNSQHW
SMIHVTWNEVNGRVIELSQNNRGQLTSFLKEEAISVPENVDYVHFKVRVEKTYYVYAYSF
DGNSWRDIDIRLDAKILSDDYVVQSYGGFFTGAFVGMANVDYSGYDLPADFDYFSYKEK
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattgaaaatccagttttgaaaggttttaatgcggatccttcgattattcgggta
gaggatacgtattatatcgcaaattcaacattcgagtggtttccgggagtgcagattcac
gagtcaaaagatttagtccactggcaactcatagggcatccactaacgacgacaacattg
ttagatatgaagggaaataaggattcgggcggcatttgggctccagatttatcgtacgcc
gacgggaaattttggctcgtatatacggatgttaagacaacggaaggcgcttttaaggac
gcgacgaattatttgacgacggcggagaacattcgcgggccttggacggatcctattaaa
ctgaatggtgttgggtttgatgcgtcactttttcacgatgatgatggcaaaaaatactta
gtccagatggagtgggatcatagggagtatcgccatccttttaatggtatcaagctgacc
gaatattcgccggaattggggcgtttattaccggaaacggggcggattatttaccacgga
accgatgtgaaattagtcgaaggaccgcatatttataagttgttcggtcaatattatctt
ttctgtgcggagggcgggactgtatacacgcatcaggaagtcgttgcgcgatctaaggag
ctgtttggcccatatgaaacgcagcctggcgatgtttttctgacggcatttgattctccg
gggaactatttgcaaaaaaatggacatggtgcgctggttgagacgccgtcgggagaatgg
tattttgcgcatttgacggggcgcccttggcatcatgaaacagagtcgagccatgatccg
agaggttggtgtacgctaggtcgggaaaccgcgattcaaaaagtggcgtgggacgaggat
aagtggccgcatattgttggtggtaaacagggaagccgttttgtcgaggcaccaaaagac
gttacgccacacgtgtatccgctaacctacgatgaaaaagatgattttgatgagccgcag
ttgaatcttaatttcaacacgttgcgcgttccttttgatgatagaatgggctcgctttca
gtgaatccggggcatttgaggcttatcgggaaaggttctctaacgaatgagcatgaatta
tcgctagttgcgaggcgctggcaggcatttcatttcgaggcagagacggcgctgaaatac
gagccaacgacgtttcagcaaatggccgggctggtaaattactataattcgcagcactgg
tcgatgattcacgttacttggaatgaagtgaacggtcgggtgattgagctaagtcagaat
aatcggggccaattgacaagctttttaaaagaagaggcgattagcgttccggaaaatgtg
gactatgtgcatttcaaagttcgcgtggaaaaaacgtattatgtgtatgcttattcgttt
gatgggaacagctggcgtgatattgacatacgattagatgccaaaattttatctgatgac
tatgttgtacagtcgtatggcggtttcttcacaggtgctttcgtgggaatggcgaatgtg
gattattctggttatgatttgcctgcagattttgactatttttcttataaggagaaataa
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