Listeria newyorkensis: OTR81_07720
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Entry
OTR81_07720 CDS
T08875
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lnw
Listeria newyorkensis
Brite
KEGG Orthology (KO) [BR:
lnw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lnw03016
]
OTR81_07720 (truA)
Enzymes [BR:
lnw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
OTR81_07720 (truA)
Transfer RNA biogenesis [BR:
lnw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OTR81_07720 (truA)
Prokaryotic type
OTR81_07720 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
WAO23136
LinkDB
All DBs
Position
complement(773544..774284)
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AA seq
246 aa
AA seq
DB search
MKRFKAVIQYDGTNFVGYQIQPNGRTVQEEIEKALLRMHKGDVVKIVGSGRTDTGVHAKG
QVIHFDSPLAIPPAKYRKALQTFTPYDISIVSVEEVASDFHARFGTTGKEYRYFVQCSEF
FDPFARHFTLHFPYKLDVSRMREAADVLTGEHDFTSFCAAGSSRENKVRTIYAIEIMEED
DTLIFSFKGNGFLYNMVRILVGTLLDVGNDRLTVAQVKANLEARDRTQGAKTAPPQGLYL
WEVHYK
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgatttaaggcagtaattcaatatgatgggactaattttgtcggttatcagatt
cagccgaatgggcggacggtgcaggaggaaattgaaaaagcgctgctgcggatgcataaa
ggtgacgtggtgaagattgttggctctgggagaacggataccggggttcatgcaaaaggt
caggtgattcatttcgattctccgcttgcgattccaccggcaaaatatcgaaaagcgttg
cagactttcacgccgtatgatattagtattgtttctgtggaggaagtggcgtcggatttt
catgcgcgtttcgggacgactggaaaggaatatcgctattttgtgcaatgttcggagttt
tttgacccgtttgcgcggcattttacgctacattttccttataaattagatgtttcgcgg
atgcgtgaggcggcggatgttctgactggtgagcatgattttacgagtttttgtgcggct
ggatcgagtcgtgagaacaaggttcggacaatttatgcgattgagattatggaagaggat
gacacgctgattttttcttttaagggaaatggctttttgtataatatggtccggattctg
gttgggacgttgctggatgttgggaatgatcggctgacagtggcgcaggttaaggcgaat
ttagaagcgcgcgatcggacgcaaggggcaaaaacggcaccgccacagggcttatactta
tgggaagtccactacaagtaa
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integrated database retrieval system
