Listeria newyorkensis: OTR81_08665
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Entry
OTR81_08665 CDS
T08875
Symbol
treR
Name
(GenBank) trehalose operon repressor
KO
K03486
GntR family transcriptional regulator, trehalose operon transcriptional repressor
Organism
lnw
Listeria newyorkensis
Brite
KEGG Orthology (KO) [BR:
lnw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lnw03000
]
OTR81_08665 (treR)
Transcription factors [BR:
lnw03000
]
Prokaryotic type
Helix-turn-helix
GntR family
OTR81_08665 (treR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_11
Rrf2
HTH_DeoR
HTH_36
HTH_Crp_2
Phage_NinH
HTH_46
HTH_24
HTH_IclR
SAMD1_WH
Ribosomal_S25
MarR
HTH_23
MarR_2
Motif
Other DBs
NCBI-ProteinID:
WAO20384
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All DBs
Position
589286..590005
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AA seq
239 aa
AA seq
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MGKAVYHDIYLELKKEIDEDHYAFKEMLPTEHVLVERFHCSRNTVRRAISELVKDGYVQS
VRGKGVMVIHQHESIEFMFGGVESMKESLTRNHKTFQTKVVHFEELTVDAALSEKTMLPI
GTEVYYIKRLRLVEEEALILDVNYFDRKVVRDLTPEKAAQSIYEYIEDELRVKIVTSKRY
IVVEKALTDDKQYLDLADYDCLAVVKNYAYDADGTMFEYTESRHRPDRFVFFDSAQRLK
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagcagtgtatcatgatatatatttagaattgaaaaaagaaattgacgaggat
cactacgctttcaaggaaatgttacctacagaacatgttcttgttgaacgctttcattgt
agtcgcaacacggtacggcgtgcgatttcagaactggtcaaagatggctacgtccaaagt
gtgcgcggtaaaggcgtcatggttattcatcaacatgagtcgattgaattcatgtttggc
ggcgtggaaagcatgaaggaatccctgactcgtaaccacaaaacttttcagaccaaggtc
gttcattttgaggaattgacggtcgatgcggctttgtcagagaaaacgatgctgcctatc
gggaccgaagtttactatatcaagcgcttacgtttggtcgaagaggaagcactcattctt
gacgtgaattattttgaccggaaagtcgtgcgtgatttgacgcctgaaaaagccgcgcag
tccatctatgaatacattgaagacgagctccgcgtgaaaatcgtgacttccaaacgctac
attgtcgttgaaaaagcactcaccgatgacaagcaatatctcgatttagccgactacgat
tgcttggcggtcgtcaaaaactatgcgtacgacgccgatgggaccatgttcgagtacacc
gaatcacgccatcgccctgaccgcttcgttttctttgattctgcgcaacgattaaaataa
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