Paenilisteria newyorkensis: OTR81_10565
Help
Entry
OTR81_10565 CDS
T08875
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lnw
Paenilisteria newyorkensis
Pathway
lnw03420
Nucleotide excision repair
lnw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lnw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OTR81_10565 (pcrA)
03430 Mismatch repair
OTR81_10565 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lnw03400
]
OTR81_10565 (pcrA)
Enzymes [BR:
lnw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OTR81_10565 (pcrA)
DNA repair and recombination proteins [BR:
lnw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OTR81_10565 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
OTR81_10565 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
DUF6175
ResIII
HHH_3
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WAO20733
LinkDB
All DBs
Position
complement(181066..183261)
Genome browser
AA seq
731 aa
AA seq
DB search
MQLNAEDLVKGLNPQQKKAVQATEGPLLIMAGAGSGKTRVLTHRIAYLMKERGVNPYNIL
AITFTNKAAREMKARVGNLLGPEAESIWISTFHSMCVRILRRDIERIGFNRNFTILDGGD
QLSVIKGILKDKNVDAKKFEPRGILAAISNAKNELMNAEEYKKEAFGFFDQMVADVYVEY
EKKLKKNQSLDFDDLIMVTIQLFERVPDVLEFYQRKFQYIHVDEYQDTNHAQYILVKLLA
ARFRNLCVVGDSDQSIYGWRGADITNIMSFEKDYPNAQTILLEENYRSTKRILEAANRVI
ENNSNRKPKNLWTNNDEGKKIFYHKALTEKEEASYVVGKIQEVVKETNRPLSDFAILYRT
NAQSRVMEEFFMKSNMAYQMVGGTKFYDRKEIKDVLAYLRLISNNDDDISLARIINVPKR
GVGAGSMDKVANTAAAYDLTVFEVLDRIEMVGLSAKISKQLVEFHDLIKGFTQMQDYLSV
TELVEQVLEKSGYRAMLENERTIEAQTRLENIDEFLSVTQNFEKESDDKTLISFLTDLAL
VADVDKLDEEDKSRGAVTLMTLHSAKGLEFPVVFLVGLEEGIFPHSRALFEEDEMEEERR
LAYVGITRAEEELYMTSAYSRMLYGRSTANKESRFIDEIPNDLIEMAHENSLTEVPFAKS
SMHSKSVVGYSSSGAEKEAWTVGDKASHKKWGVGTVVSVKGTGSNMELDIAFPSPTGVKR
LLAEFAPVEKV
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgcaattaaatgcggaagatttagtaaaaggattgaatccacaacagaagaaggcggtc
caagctacagagggacctcttttgatcatggctggggcaggaagtgggaagacgcgtgtt
ttgacgcatcgtatcgcttacttgatgaaagagcgtggcgtgaatccctataatattttg
gcgattacgtttacgaataaggcggcgcgtgagatgaaagcgcgtgttggtaatttgctt
gggccagaagcggaatcgatttggatttcgacgtttcactcgatgtgcgtgcggattttg
cgccgagatattgagcggattggatttaaccgcaattttacgattttggatggcggggac
cagctttcggttattaagggcattttaaaagataagaacgtggatgcgaagaagtttgaa
ccgcgtgggattttggcggcgatcagtaatgcgaagaacgagctgatgaacgcggaggag
tacaagaaggaagcatttggcttttttgatcagatggttgcggatgtgtacgtggaatat
gagaagaagttgaaaaagaaccagtcgcttgattttgatgatttgatcatggtgacgatt
cagttgtttgagcgagtgccggacgtgttggagttttatcagcggaaatttcagtatatt
catgtggatgagtatcaagatacgaaccatgcgcaatatattttagtgaaattgctggcg
gcgcgattccgtaatctttgtgtggttggggattcggatcagtcgatttatggctggcgt
ggtgcggatattacgaacatcatgtcgtttgagaaggattatccgaatgcgcagacgatc
ctgttggaggagaattaccggtcgacaaagcggattttggaagctgcgaaccgcgtgatt
gagaacaatagtaatcggaaaccgaagaacttgtggacgaataacgatgaaggtaagaaa
attttctatcacaaggcgttaacggagaaggaagaagcttcgtacgttgttgggaaaatt
caagaggtggtcaaggagacgaatcgtccgctatcggatttcgcgattctttatcggacg
aatgcgcagtcgcgtgtgatggaggaattcttcatgaagtcgaatatggcgtaccagatg
gttggcggcacgaagttctatgatcgtaaggagatcaaggatgtgttggcttacttgcgc
ctgatttcgaacaacgatgatgacattagtttagcgcggattattaatgtgccaaaacgt
ggtgtcggagcgggttcgatggataaagtcgcgaatactgcggcggcgtatgatttgacg
gtttttgaagtgctggatcggatcgagatggtcgggttatcggcgaagatttcgaaacaa
ttggtggaattccatgatttgattaaaggcttcacgcaaatgcaggattatttgtcggtg
acggagctggtggagcaggttcttgagaaatcgggatatcgcgcgatgcttgaaaacgag
cggacgattgaggcgcagacgcgtttggagaatattgatgagttcttgtcggtaacgcaa
aactttgaaaaggaaagcgatgataagacgctgattagctttttgacggatttggcgctt
gttgcggatgtggataagttggatgaagaggacaagtctcgtggcgcggtgacgctcatg
acgctacactcggcgaaaggtttggagttcccggttgtctttttagtgggacttgaggaa
gggattttcccgcatagccgagcgctttttgaggaagatgagatggaagaggaacgcagg
ctggcgtatgttggtatcacgcgcgcggaagaggaactgtatatgacgagtgcctattcg
cggatgttatacggacgttcgacagcgaacaaggaatcgcgttttattgatgaaattccc
aatgatttgattgaaatggcgcatgagaatagtttgacggaagtgccgtttgccaagtca
tctatgcatagcaaatcggtggttggttatagttcgtctggcgcggagaaagaggcgtgg
acggttggcgacaaggcgagtcataagaaatggggcgtcggaacggttgtcagcgtgaaa
ggaacgggaagtaacatggagcttgatattgctttcccgagtccaactggagtaaaacga
ttgctggcggaatttgcgcctgttgaaaaagtataa
DBGET
integrated database retrieval system
