Listeria newyorkensis: OTR81_11860
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Entry
OTR81_11860 CDS
T08875
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lnw
Listeria newyorkensis
Pathway
lnw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lnw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OTR81_11860 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lnw03400
]
OTR81_11860 (mutM)
Enzymes [BR:
lnw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
OTR81_11860 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
OTR81_11860 (mutM)
DNA repair and recombination proteins [BR:
lnw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OTR81_11860 (mutM)
BRITE hierarchy
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
zf-TFIIB
DNA_ligase_ZBD
TF_Zn_Ribbon
Motif
Other DBs
NCBI-ProteinID:
WAO20951
LinkDB
All DBs
Position
complement(3277495..3278316)
Genome browser
AA seq
273 aa
AA seq
DB search
MPELPEVENVRATLAELVIGKEIDQVIVGVPKMIVGMPAEQFVGNMIGQKIEAVRRRGKF
LLIDTTDGTLLSHLRMEGKYRLNNATDPVDKHTHVTFHFTDNTELRYLDVRKFGTMELVL
KGQEGLTKSIQKLGPEPLSDTFEKSAFAMKLMKSGRAVKTVLLDQSLVAGIGNIYADEVC
FQARVLPERPANTLTPAEITRLYESTRSIMAEAVALGGSTIRTYVNSQGKIGGYQDKLQV
YGEKDNPCPVCGTPIVKIKLNGRGTHFCPKCQK
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattaccagaagtagaaaacgttcgggcaacactcgccgaacttgttatagga
aaagaaatcgatcaagttatcgtcggcgttccaaagatgatcgtcggcatgccagcagaa
caatttgttgggaatatgatcgggcaaaaaatcgaagccgttcgccgtcgcggcaagttt
ctgctaatcgacacaacggatggcacgcttttatcgcatttgcgcatggagggcaagtac
cgtctcaataatgcgacagatccagtggacaagcacacacacgtcacgttccacttcacg
gataacacagaactacgctaccttgatgtccggaagtttggcacgatggaactcgtatta
aaagggcaagaaggactcaccaaatctatccaaaaactcggaccagaaccgctttccgac
acgtttgaaaagagcgcttttgcgatgaaactaatgaaatcaggtcgcgccgtcaaaacc
gttttgctggatcaaagtcttgttgcgggtatcggaaatatttacgcggatgaggtttgt
tttcaggcgcgggtacttccggaaagaccggcgaacacattaacgccagctgaaatcacg
cgactttatgagagtactaggtcaatcatggcagaagcagtcgcactcggaggttccacc
attcgtacgtatgtgaactcacaaggaaagattggcggttatcaagataaactgcaagtc
tacggcgaaaaagacaatccgtgtccggtttgtggcacgccaattgtgaaaatcaaactg
aatggcaggggcacgcatttttgcccgaaatgtcagaaatag
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