Listeria newyorkensis: OTR81_12035
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Entry
OTR81_12035 CDS
T08875
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
lnw
Listeria newyorkensis
Pathway
lnw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lnw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OTR81_12035 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lnw03400
]
OTR81_12035 (ruvB)
Enzymes [BR:
lnw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OTR81_12035 (ruvB)
DNA repair and recombination proteins [BR:
lnw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OTR81_12035 (ruvB)
RecFOR pathway proteins
OTR81_12035 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_16
Mg_chelatase
nSTAND3
RNA_helicase
NB-ARC
DUF815
AAA_25
AAA_14
Bac_DnaA
TsaE
AAA_3
MCM
Sigma54_activ_2
NACHT
AAA_22
Rad17
IstB_IS21
AAA_24
NTPase_1
Resolvase
DUF1400
Parvo_NS1
ABC_tran
AAA_33
NPHP3_N
AAA_18
AAA_17
AAA_28
AAA_19
Torsin
ATPase_2
AAA_11
AAA_PrkA
Motif
Other DBs
NCBI-ProteinID:
WAO20984
LinkDB
All DBs
Position
complement(3242400..3243401)
Genome browser
AA seq
333 aa
AA seq
DB search
MEDRIISGENVNQEEVSFEKSLRPQTLAQYIGQEKVKHNLAVFIEAAKQREEALDHVLLY
GPPGLGKTTLAMVIANEMGTAMRTTSGPAIERPGDLATILTTLEPGDVLFIDEIHRLNRS
IEEILYPAMEDYCLDIVIGTGPTARSVRLDLPPFTLIGATTRAGQLSAPLRDRFGVIDHL
EFYSEEQLTDIVTRTADILDTEVEKYGAVEIARRSRGTPRIANRLLKRVRDFAQVRSDGL
VTESLAREALTLLQVDPRGLDTIDQRLLATIIGSFRGGPVGLDTIAASIGEERETIEDMQ
EPYLLQIGFLQRTPRGRLVTDAAYEHLGLTKSE
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggaagaccgcatcatttctggtgaaaacgtgaatcaagaagaagtttccttcgagaaa
agtctccgcccacagaccttagcgcaatatattgggcaagaaaaagtgaagcataattta
gcggtttttattgaggcggcgaaacagcgggaagaggcgctggatcatgtgcttttgtac
gggccaccggggcttgggaagacgacgcttgcaatggtgattgcgaatgaaatgggaacc
gcgatgcgtacgacgagtggtcctgcgattgagcgtcctggtgacttggcgacgattttg
acgacgcttgagccgggggatgtgttgtttattgatgagattcatcgattgaaccgctcg
attgaggagattctatatccggcgatggaggattattgtctggatattgtgattgggacg
ggtcctacggcgcgatcggtgcgtttggatttgccaccatttacgttgattggggcgacg
acgcgtgctgggcagttatcggcgcctttgcgggatcggtttggtgtgattgatcatttg
gaattttattcggaggagcagttgacggatattgtgacgcggacggcggatattttggat
acggaagtggagaaatatggcgcggtggagattgcaagacgatcgcgtgggacacctcgg
attgcgaatcggttgctaaaacgggtgcgtgattttgcgcaggttcgtagtgatggtttg
gtgacggagagtttggcgcgtgaggcgttgacgcttttgcaggtggatccgcgaggtttg
gatacgattgatcagcgtttactggcgacgattattggctcgtttcgtggtgggccggtt
ggtctggatacgattgcggcgagtattggtgaggagcgcgaaacgattgaagatatgcaa
gaaccctatttgttacagattggctttttacagcggacgccacgtgggagactggtgacg
gacgcggcttatgagcatttaggactaacgaaaagtgaatga
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integrated database retrieval system
