Listeria newyorkensis: OTR81_12060
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Entry
OTR81_12060 CDS
T08875
Symbol
secDF
Name
(GenBank) protein translocase subunit SecDF
KO
K12257
SecD/SecF fusion protein
Organism
lnw
Listeria newyorkensis
Pathway
lnw02024
Quorum sensing
lnw03060
Protein export
lnw03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
lnw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
OTR81_12060 (secDF)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
OTR81_12060 (secDF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OTR81_12060 (secDF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lnw02044
]
OTR81_12060 (secDF)
Secretion system [BR:
lnw02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
OTR81_12060 (secDF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecD_1st
SecDF_P1_head
Sec_GG
DUF1673
MMPL
DUF7472
Motif
Other DBs
NCBI-ProteinID:
WAO20989
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Position
complement(3236906..3239167)
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AA seq
753 aa
AA seq
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MIKKSKIITFFLIVAIIFGTVIFTAKPVLDKINLGLDLQGGFEVLYQVEPADGKSKVTNE
TLKETVATLDQRINTLGVTEPVITIEGGNRIRVQLAGVTDQTEARKILSTQAVLSFRDAN
DKLMMDGSDLVPGSAKAVTNDKNQAIVTLEMKNKDKFASVTKTIVAKAPDNQLVIWLDWK
EGLKYKTERVKEKPAFLSAPNVDRELDTKKVEISGSFTMDSAKELANLLNSGALPVKLTE
VYSTSVGAQFGQDALSETVVAGLVGVIAIFIFMMAVYRLPGIIASITLVAYTYIVLLILG
LLNATLTLPGIAGLILGIGMAVDANVITYERIREELKVGKSTKTAFDTGGKESFRAIFDG
NISTLIVAGVLFYFGSSSIKGFATVLIISILVSFLTAVWGSRALMGLLVSSNALNNKPGL
FAVRRKDIHDLHEGKQTFDLKTHFDKYDFVKHHRAFLTTFAVIVVIGIVILSVFKLNLGI
DFASGTRAEVTSTQALTEEQINKDLKEIDMPSDDVNFQNNNKTAVISYKGALTQDEIAKF
KTHFKKAYGTDPNISTVTPTVGQELAKDGLWALAIASLLIVVYIAFRFELSMGIATILSL
LFDAFVIFIFFSIFQLEVDLTFIAAVLTVIGYSINDTIVTADRIRDVSFKMGRFKKPEDI
AFAVNHGLRQTFIRSINTILTVLFTVIALIIFGNESILNFSIALLVGLVSSVFSSIFMAM
QLWYVFKKRELKKKGVINTQKKKKRARTDQPVV
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgataaagaaaagtaaaataattacatttttcctgatcgtagcaattatttttggaaca
gttatttttactgcaaaacctgttctggataaaattaatctcgggctagatttgcaaggt
ggtttcgaggttctttaccaagtagagcctgctgacgggaaaagtaaagtaaccaatgaa
acactgaaagaaacagtggcaacattggatcaacgtattaatacattaggggttacagaa
ccagttatcacaattgagggcggaaaccgtattcgggttcaactcgcaggggtaacggat
caaacagaagcacgaaaaatcctatcgacacaagctgtcttgtcattccgtgatgctaat
gacaagctgatgatggacggtagtgaccttgtaccaggcagcgcaaaagctgtaacaaac
gacaaaaaccaagcaatcgttacgttggaaatgaaaaacaaagataagtttgctagtgta
accaaaacaattgttgcaaaagcgccagacaatcagttagttatttggttggactggaaa
gaaggcctgaaatacaaaacagaacgtgttaaagaaaaaccagcgttcctttctgcgcca
aacgtagatcgtgaattagacacgaagaaagtggaaatatcaggtagttttacaatggat
tctgcgaaagaactagcgaacttgctaaattctggtgcgcttcctgttaaattaaccgag
gtttactctacttctgtcggcgcacaatttggtcaagatgccttgtctgaaaccgttgta
gccggacttgttggtgttattgctatctttatcttcatgatggctgtataccgtttacca
ggtatcatcgcttccatcactttggtggcgtacacgtacattgtattacttattttagga
ttattaaatgcaacccttacactaccaggtattgccggattaattctcggtattggtatg
gcggtcgatgccaacgttattacctacgagcggataagggaagaactcaaggttggtaaa
tccacgaaaacagccttcgatacaggtgggaaagaatccttcagagctatctttgatgga
aacatttcgacgcttattgttgctggggttcttttctacttcgggtcaagctcgattaaa
ggtttcgcgacggtattgattataagtattcttgtgagtttcttgactgctgtttggggt
tcaagagcgctaatgggacttcttgtaagtagtaatgcactgaataacaaaccaggatta
tttgcggttcgtcgtaaagatatccacgatttacatgaaggtaaacaaacattcgatttg
aaaacgcattttgataagtatgatttcgtcaaacatcaccgtgcgttcttgactactttt
gcggtcattgtggtgatcgggattgtgattctatcggtgttcaagttgaatctgggtatt
gattttgcgagtggtacgcgtgcggaggtcacttcgacacaggcgctgaccgaggagcag
attaataaggatttgaaagagattgatatgccttctgatgatgtcaatttccaaaataat
aacaagacggccgttattagttataagggtgccttgacgcaggacgaaattgcgaagttt
aaaacgcatttcaagaaagcgtacgggacagatccgaatattagtacggtaacgccgact
gttggacaggaactggcgaaggatgggttgtgggcgcttgctattgcctcgttactgatt
gtggtttatatcgcgtttcgtttcgagttgtcaatgggtattgcgacgattctgtcgtta
ctatttgacgctttcgtgatcttcatcttctttagtatcttccaactggaggtcgatttg
acgtttattgcggcagtgctgaccgttatcggttactccatcaatgatacgattgttacg
gcggataggattcgagacgtttccttcaaaatgggacgtttcaaaaaaccagaggatatc
gcgtttgcggttaaccatggtttacgtcaaacgtttatccgttcgatcaataccattttg
actgtattattcacggttatcgcgcttattatctttggtaatgagtcgattctgaacttc
tcgattgcgcttttagttggattagtatccagtgtgttctcatccatcttcatggcaatg
caattgtggtatgtattcaaaaaacgtgagctgaagaaaaaaggcgttattaatacacag
aagaaaaagaaacgcgcaagaacagaccaaccagtcgtataa
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