Listeria newyorkensis: OTR81_12920
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Entry
OTR81_12920 CDS
T08875
Symbol
gndA
Name
(GenBank) NADP-dependent phosphogluconate dehydrogenase
KO
K00033
6-phosphogluconate dehydrogenase [EC:
1.1.1.44
1.1.1.343
]
Organism
lnw
Listeria newyorkensis
Pathway
lnw00030
Pentose phosphate pathway
lnw00480
Glutathione metabolism
lnw01100
Metabolic pathways
lnw01110
Biosynthesis of secondary metabolites
lnw01120
Microbial metabolism in diverse environments
lnw01200
Carbon metabolism
Module
lnw_M00004
Pentose phosphate pathway (Pentose phosphate cycle)
lnw_M00006
Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P
Brite
KEGG Orthology (KO) [BR:
lnw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
OTR81_12920 (gndA)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
OTR81_12920 (gndA)
Enzymes [BR:
lnw01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.44 phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating)
OTR81_12920 (gndA)
1.1.1.343 phosphogluconate dehydrogenase (NAD+-dependent, decarboxylating)
OTR81_12920 (gndA)
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Gene cluster
GFIT
Motif
Pfam:
6PGD
NAD_binding_2
Shikimate_DH
NAD_Gly3P_dh_N
F420_oxidored
3HCDH_N
KARI_N
2-Hacid_dh_C
MitMem_reg
ApbA
RS_preATP-grasp-like
Pyr_redox
GFO_IDH_MocA
Phage_portal
NAD_binding_11
Motif
Other DBs
NCBI-ProteinID:
WAO21155
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Position
3058001..3059419
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AA seq
472 aa
AA seq
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MAKQEIGVIGMGVMGRNLALNIESRGYSVSIFNRSSEKTKAVAEEHSDKKLVPTYNLEEF
VNSIEVPRRILLMVQAGAATDMMIDAVKPFLSQGDILIDGGNTFFKDTIRRNKTLSEEGF
NFIGTGVSGGEEGALKGPSIMPGGQRKAYDLVAPILQEIAAVADGEPCVTYIGPDGAGHY
VKMVHNGIEYGDMQLIAEAYTILKQIGGLTNDELADVFTEWNDGELDSYLIQITKNIVKT
KDPETGKPIVDVILDKAGQKGTGKWTSQSALDLGVPLSLITESVFARYISALKEERVHAS
TVLSGPSNYSFNGDKKAFVESVRRALYFSKIASYAQGFAQMKAASDEYEWDLQYGEIAKI
FRAGCIIRARFLQKITDAYNNDKNLNNLLLDPYFKDIAHNYQDALREVVAESVKAGIPVP
TFTAAISYYDSYRSEVLSANLIQAQRDYFGAHTYERVDKAGTFHTEWPEIDE
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacaagaaattggcgttatcggaatgggcgtaatgggtcgcaacttggcctta
aatatcgaaagtcgtggttacagtgtctcgatttttaaccgctctagcgaaaaaacgaaa
gcagtcgcagaagaacatagcgacaaaaaattggttcctacgtataacttagaggagttt
gtgaactccatcgaagtgcctcgtcgtattctattaatggtacaagcaggtgcggcaacg
gatatgatgattgatgcagtcaaacctttcctaagccaaggcgatattttgattgatggt
gggaatacgttctttaaagatacgattcgccgcaacaaaacgctaagcgaagaaggtttt
aattttatcggaactggtgtttctggtggggaagaaggcgcgttaaaaggaccttctatt
atgcctggtggtcaacgcaaagcctatgatttagtcgctccaattttgcaagagattgcg
gctgtagcggacggcgaaccttgtgtgacttacatcggtcctgatggcgctggacactat
gtgaaaatggtgcataacggcattgagtacggcgacatgcaacttatcgcagaagcttac
acgattctaaaacaaatcggtggcttaacgaatgacgagcttgctgacgtgttcacagaa
tggaatgacggcgaactcgatagttacttaatccaaatcacaaaaaacatcgtgaagaca
aaagaccctgagacaggtaagccgattgttgatgttattcttgataaagcagggcaaaaa
ggaacgggtaaatggacaagtcaaagcgctctagaccttggtgtaccgctttctcttatc
acagaatccgtattcgcacgttacatttctgcgttaaaagaagagcgcgtacatgcaagt
accgttttaagcggtccaagcaactactcattcaacggagacaaaaaagccttcgtagaa
tctgtacgccgcgcactatatttcagtaaaatcgcgtcctacgcacaaggctttgcacaa
atgaaagccgcgtcagacgaatacgaatgggatctacaatacggcgaaatcgcgaaaatt
ttccgcgcaggttgtattatccgcgctcgtttcctacaaaaaatcacagacgcgtacaat
aacgataagaatttaaataacttgttgttagatccatatttcaaggatattgcgcataac
taccaagacgcattgcgtgaagtagtagctgaatctgtgaaagcaggaattccagtacca
acattcacggcagcaattagttattacgatagctaccgctcagaagtactatccgccaac
ctaatccaagcccaacgcgactacttcggcgcacacacatacgaacgcgtagataaagca
gggacgttccatacagaatggccggagattgatgaataa
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