Paenilisteria newyorkensis: OTR81_13165
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Entry
OTR81_13165 CDS
T08875
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lnw
Paenilisteria newyorkensis
Pathway
lnw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lnw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OTR81_13165 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lnw03019
]
OTR81_13165 (pnp)
03016 Transfer RNA biogenesis [BR:
lnw03016
]
OTR81_13165 (pnp)
Enzymes [BR:
lnw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
OTR81_13165 (pnp)
Messenger RNA biogenesis [BR:
lnw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
OTR81_13165 (pnp)
Transfer RNA biogenesis [BR:
lnw03016
]
Prokaryotic type
tRNA degradation factors
OTR81_13165 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
KH-I_KHDC4-BBP
SPATA25
RICTOR_M
KH_2
Motif
Other DBs
NCBI-ProteinID:
WAO21202
LinkDB
All DBs
Position
3013102..3015273
Genome browser
AA seq
723 aa
AA seq
DB search
MTEKQVFKSTWAGKELAIEVGQMAKQANGAALIRYGDTVVLTAAVGSRKPRPGDFFPLTV
NYEEKMYAVGKVPGGFLKREGRPSDRATLTARLIDRPIRPLFAEGYRNDVQITSTVLSVD
QDCSPEMAAMLGSSISLCISDIPFEGPIAGVDVGRVNGEYIINPTIEQQELSDISLTVAG
TKEAINMVEAGAKEVPEEAMLEAIMFGHEEIKRLIAFQEEIVAAVGKAKMEIELFVPNAE
LVAEVTARAEADMKIAIKTEEKLAREENINVLKEAVVAEYEAKELEDAAEVLPEVKHILE
MLEKNEMRRLISQDKIRPDGRKVDEIRPLSSEVGILPRVHGSGLFTRGQTQALSVCTLAP
LREHQIIDGLGLEDSKRFMHHYNFPQFSVGETGPRRAPGRREIGHGALGERALQQVIPSE
EDFPYTIRLVSEVLESNGSSSQASICGSTLAMMDAGVPIKAPVAGIAMGLVKLGDDYTIL
SDIQGMEDHFGDMDFKVAGTRDGITALQMDIKIDGLSRQILEEALTQAKAGRLHILEHLE
ATINTPRETLSEYAPKIVTINIKPDKIKDVIGPGGKQINQIIDETNVKIDIEQDGTVFIA
SQDDAMIEKAKAMIEEIVREVQVGEIYDGKVRRIEKFGAFVELFKGKDGLIHISELAHER
VGKVEDILKMGDIVKVKVTEIDDHGRVNVSRKALIEKKEGDTEQPNRAPRKEGYKKPYTN
DKK
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaaaacaagtatttaaatccacatgggcaggcaaagaactagcaatcgaagtt
ggtcaaatggcaaaacaagcaaacggtgcagcgcttattcgctacggcgataccgttgtt
ttaacagcagctgttggttcgcgtaaaccaagaccgggtgactttttcccgttgactgta
aattatgaagaaaaaatgtacgctgttggtaaagttccaggcggcttcttaaaacgcgaa
ggtcgtccaagtgatcgcgcaacattaacggcacgtctgattgaccgtccaatccgtccg
ctttttgcagaagggtatcgtaacgatgttcaaatcacatctacagtgcttagcgtggat
caagactgctcaccagaaatggctgcaatgcttggttcatcgatttcactttgcatctcg
gatattccttttgaagggccgattgcgggtgtagatgttggtcgtgtgaacggggaatac
atcattaatccaaccatcgagcaacaagaattaagcgatattagcttgacggttgctggg
acaaaagaagccatcaacatggtagaagcaggagcgaaagaagtgcctgaagaagcgatg
ttagaagctatcatgttcggtcacgaagaaatcaaacgcttaatcgcgttccaagaagaa
atcgttgccgcagttggtaaagcgaaaatggaaatcgaattattcgtgccaaacgcagag
cttgttgcagaagtaacggctcgcgcagaagcagatatgaaaatcgcgattaaaaccgaa
gaaaaattagcgcgcgaagaaaacattaacgtgttaaaagaggcggttgtcgcagaatat
gaagcaaaagaattagaagacgcagcagaagttttgccagaagtaaaacatattttagaa
atgcttgaaaaaaatgaaatgcgtcgcttgatttcacaagataaaatccgtccagatggt
cgtaaggtagacgaaattcgtccgctatcatctgaggttggtattttgccacgcgtccat
ggttcaggactattcacacgtggacaaacgcaagcacttagcgtatgtacattagcgcca
cttcgcgagcaccaaatcattgatgggcttggtctagaagattccaaacgcttcatgcat
cattacaacttcccgcagttcagtgttggagaaacaggacctcgtcgtgcaccaggtcgt
cgtgaaatcggtcacggagcacttggtgaacgcgcgttacaacaagttattccaagtgaa
gaggatttcccatacacgattcgccttgtatctgaggttttagagtcaaacggttcaagt
tcacaagcaagtatttgtggatcgacgcttgcaatgatggatgcaggtgtgccaattaaa
gcgccggttgctggaatcgcgatgggacttgtcaaacttggcgatgactacacaattctt
tctgatattcaaggtatggaagatcatttcggcgacatggatttcaaagtagctggaaca
cgtgacggtattactgccttgcaaatggatatcaaaatcgatggtcttagccgccaaatt
ttagaagaagccttgacacaagcgaaagcaggccgtctgcacattctagaacacctagaa
gcgaccatcaacacacctcgcgaaaccttgtcagaatatgcacctaagatcgttacaatc
aatatcaaacctgataaaatcaaggacgttatcggacccggcggtaaacaaattaaccaa
atcatcgacgaaacgaatgttaaaattgatatcgaacaagacggtacagttttcatcgcg
tctcaagatgatgccatgatcgaaaaagcgaaagcaatgattgaagaaatcgtccgcgaa
gtacaagttggcgaaatctatgatggtaaagttcgtcgtatcgagaaattcggagctttt
gttgaattattcaaaggcaaagatggcttgattcatatttctgaactagcgcacgaacgc
gttggtaaagtggaagacatcctgaaaatgggtgatatcgtgaaagtcaaagtaacagaa
atagacgatcacggtcgtgtaaacgtatctcgtaaagctttgattgagaaaaaagaaggc
gatacagaacaaccgaaccgcgcaccacgtaaagaaggctacaaaaaaccttacaccaac
gataaaaaataa
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