Listeria newyorkensis: OTR81_13185
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Entry
OTR81_13185 CDS
T08875
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lnw
Listeria newyorkensis
Brite
KEGG Orthology (KO) [BR:
lnw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lnw03016
]
OTR81_13185 (truB)
Enzymes [BR:
lnw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
OTR81_13185 (truB)
Transfer RNA biogenesis [BR:
lnw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OTR81_13185 (truB)
Prokaryotic type
OTR81_13185 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
WAO21206
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All DBs
Position
3010366..3011292
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AA seq
308 aa
AA seq
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MDGIIPLWKEKGMTSHDCVFKLRKILQTKKVGHTGTLDPDVEGVLPICIGRATKLAEYIT
DEGKTYEATVTLGSATTTEDASGEVVAEKEITETILPIDVEKAAKSFVGEIVQIPPMYSA
VKVNGRKLYEYAREGIEVERPKRTVNIYAIELLKPYVPISPDNNTFHIRIKCGKGTYIRT
LAVMIGEKLGYPAHMSELKRTQSGIFTEEQCFTLSEIEALRAKEEEASFLYPLEDGLSDM
PQQDISELIHEKVLNGVVLPEQFIKERSQGRVALLYKNKLTAIYVQHPERRDFWKPEKVI
ELREGKLN
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggacggaattatccccttgtggaaagaaaaaggcatgacgagtcatgactgcgtattc
aaactgcgcaaaattctccaaacaaaaaaagtcggacatacagggacgctcgatcccgat
gtcgaaggtgttttgccgatctgtattggtcgcgcaacaaaactcgccgaatacattacg
gatgaaggcaaaacgtacgaagcaacggttacgcttggcagtgccacaacgaccgaagac
gcgagtggagaagtagtcgctgaaaaagaaatcaccgaaactattttaccgattgatgtc
gaaaaagctgcaaaatctttcgttggggaaatcgtgcaaattccgccgatgtactccgcg
gtgaaggttaatggccgcaagttgtatgaatatgcaagagaaggcatagaggtagaacgc
ccgaaacgcacggtgaatatttatgcaatcgaactcttgaagccttacgtaccaataagt
ccggacaacaataccttccacatacggattaaatgtggcaaaggaacgtatatccgtaca
cttgccgtcatgatcggtgaaaaactaggatatcccgcgcatatgtccgagttaaaacgc
acgcaaagcggtattttcacagaagaacaatgcttcacattatctgaaattgaagcgctg
cgagcaaaagaagaagaggccagcttcctgtatccgttagaagacggcttatctgacatg
ccacaacaagacatttcggagctgattcacgagaaagtgctaaacggcgttgtgctacca
gaacagttcatcaaagaacgcagccaaggacgcgtagccttgctctataaaaataaatta
acagccatctatgtacaacatccagaacgtcgcgatttttggaaaccagaaaaagtgatc
gaactacgcgaaggtaaattaaactaa
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