Paenilisteria newyorkensis: OTR81_13335
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Entry
OTR81_13335 CDS
T08875
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lnw
Paenilisteria newyorkensis
Brite
KEGG Orthology (KO) [BR:
lnw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lnw03400
]
OTR81_13335
DNA repair and recombination proteins [BR:
lnw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OTR81_13335
Archaeal homologous recombinant proteins
OTR81_13335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
ABC_tran
Glyco_hydro_32N
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
WAO21233
LinkDB
All DBs
Position
2969750..2972821
Genome browser
AA seq
1023 aa
AA seq
DB search
MRPLKLTMQAFGAYAKAETIDFTELGQERIFVISGKTGAGKSTIFDAISFAIFGKANTND
REGFSLRSHFAKAEDLTEVSLEFLLRDVRYLVRRVPQQEVPKQRGEGMTTVTAKAELYEL
DGDEETLLASSVRDVGAKMEEIIQLNVDQFRQILMIPQGEFRELLVAESKEKEAILQRLA
HTHFYQLIENQLWQQQKDQEQQVRLLREKVAGITQEAFDAEALAGKTALDIELMFAERLI
VEQETMNGLQEQMEFAKEKAEITAKNVTLAEEKIAEWAQLAKLRTEKVALDEQLDTRNQE
QETVDLARKAGTLIDQDALCLRLKQQLDEAKLDERQALDALKNREVAFEKAHLEIEKVKE
IELEYVAWVKKRDLLQTMEAKVTRALAVQEELAQQSGRQQDLAQKLEQFILQEKGLLEQS
EKLAERVRLVQDSRLKYAETKQRLTELKQEEAFVLVEIKKWEQKQAWEAELVVLNREWKV
AEEQFSEAQAKYEKLGAMWQHEQAAMLALSLVDGDACPVCGSLEHPNAALETADVSKTEV
DTARESQSAKQDAVKAIVTKIEQKRWQIEQIVFASEESLQVLKEKQALYGEEVATKEKEL
AEMDVFLVEENDVEEQLERNKQEMIKLGEEKAQLQTAYEEVSKSVDAAKTTHTLLLEDVP
EEFRDPTVFYEEQKALTAKITDFEEKKGRAELAYNTAKEGHYKAISASDMAGKAAVKAED
ALATQRTIFKDIMAANGFADYASYQRAILSPEDLDAKERFIRDFEQRYHFVSERLKETET
RLAGAEQPDLIALQRLDDEAKRLYHEKAERWMGQKDVVRKLSELSERFLKYLVETSEAEK
AYADVGYLADMARGKNDRRLTFERFVLATFLDTILLRANGRLKKMTNGRFQLNRKKEKSK
GNVQSGLELEVYDEYTGLERHVKTLSGGESFKTSLALALALAEVVQEMSGGISLETMFID
EGFGTLDPESLEMAVECLLETQESGRLVGIISHVPELKERIPSRLEVTATNHGSTTKFFA
QGL
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgaggcctttgaaactgacgatgcaggcttttggtgcttatgcgaaggccgagacgatt
gattttacggagctaggtcaggaacggatttttgtgatttctggaaaaacgggcgctggg
aagtcgacgatttttgatgcgattagttttgcgatttttgggaaggcgaatacgaatgat
cgggaaggtttttcgctcaggagtcattttgcgaaagcggaggatttgacggaagtgtcg
cttgaatttttgcttcgggatgtgcggtatttggttcgtcgtgtgccgcagcaggaggtt
ccgaagcagcgcggggaagggatgaccacggttactgcgaaggcggagctctatgaactg
gatggggatgaggagacgttactcgcgagttcggttcgggatgttggcgcgaaaatggaa
gagattatccagttgaatgtggatcagtttcgccaaattttgatgattccgcagggcgag
ttcagggaattgcttgtagcggagagtaaggagaaggaagcgattttgcagcggttggcg
catacgcatttctatcagcttattgaaaaccagttgtggcaacagcagaaggatcaggaa
cagcaagtgcgattattgcgtgaaaaagtggcggggattacgcaggaggcttttgacgcg
gaggcgcttgctggaaaaacggcgctggatattgagttgatgtttgccgaacgattgatt
gtggagcaggaaacgatgaatgggcttcaggaacagatggagtttgcgaaggagaaagca
gaaatcacggctaaaaatgtgacattggcggaggaaaaaatcgcggaatgggcgcaatta
gcgaaattacggacggaaaaagtggcattggatgagcaattggacacgcgaaatcaggag
caagaaacggtcgatttggcgcgaaaagctgggacgttgattgaccaggatgcattgtgt
ttgcggttaaaacagcaattagacgaggcgaaattggatgagcggcaggctttggatgct
cttaaaaatcgggaagttgcgtttgaaaaagcccatttggaaatagagaaagtgaaggaa
atcgagttagaatacgtggcttgggttaaaaagcgggatttgctgcaaacgatggaggca
aaagtgacgcgggctctagccgtgcaagaagaattagcacagcagagtggccggcagcaa
gatttagcgcagaaattagaacagtttattttgcaggaaaaagggctgttagagcaatcg
gaaaaattagctgagcgtgtgcgattggtgcaggattcgcgactgaaatatgcggaaacg
aagcaacggctaaccgagttgaagcaagaagaagcgtttgttttggttgaaataaagaag
tgggaacagaagcaggcgtgggaagcggaattagttgtattaaatcgtgaatggaaagtg
gcagaagagcagtttagcgaagcgcaagcaaaatatgagaagttgggtgcgatgtggcag
catgaacaagcggcgatgttggcgttaagccttgtggatggtgatgcgtgtccagtttgc
ggttcattggagcatccgaatgctgcattggaaacggcggacgtgtcaaaaacagaggta
gacacggcaagagagagtcagagcgccaagcaggacgctgtaaaagcaattgtgacgaaa
atagaacagaaaagatggcagatcgaacaaatcgtatttgcttcggaggaatcgttgcag
gttttgaaggaaaaacaagcgttgtatggcgaggaagtagcgacaaaagagaaggaactc
gcggaaatggacgtctttctagtggaagagaatgatgtggaggaacagctggaacggaat
aaacaggagatgatcaagctcggcgaggaaaaagcgcagttgcagacggcgtatgaagaa
gttagtaaaagtgttgatgctgcaaaaacgacgcacaccttgcttttggaggatgtgccg
gaggagtttcgggatccgactgttttttatgaagaacagaaagcgttgacggcgaaaatt
actgattttgaagagaagaagggacgcgcggaattggcatataatacggcgaaagaaggg
cattacaaagcgatttcggcaagcgatatggcggggaaagcggctgtgaaggcggaggat
gctttggcaacgcagcgcacgatttttaaagatatcatggcggcgaacggttttgcggat
tatgcatcctatcagcgagctattttgagtccggaagatttggacgcgaaggagcgcttt
attcgtgattttgagcagcggtatcattttgtttcggagcgtttgaaagagacggagacg
aggcttgcaggagccgaacaaccggatttaatagcattgcaacgactggatgatgaggcg
aaacggctgtatcatgaaaaagcagagcgctggatggggcaaaaagacgttgttcgcaag
ttatcggagttatccgagcgatttttgaaatatctggtggagacgagtgaagcggagaag
gcttacgcggatgttggctacttggcggatatggcgcgcgggaaaaatgatcgacgctta
acgtttgaacgctttgttttggccactttcttagatacgattttgctccgggcgaacggt
cgattgaaaaaaatgacgaacggtaggtttcaactgaaccgcaaaaaggaaaagtcaaag
ggaaacgtgcaaagtggtttggagcttgaggtttacgatgagtatactggtttggagcgg
catgtcaaaacattatctggcggggagagttttaaaacgtccttagctttggcattagct
cttgcggaagttgtgcaggaaatgtcaggtgggatttcgctggagacgatgtttattgat
gagggatttggtacgctggatccggaatcgttggaaatggcggtggagtgcttgcttgaa
acgcaggaatcgggacggcttgttggtattatctcacatgtgccagagttgaaagaacgg
attccgtcgcgactggaagtaacggcgacaaaccacggaagtacgacgaaatttttcgcg
caaggcctataa
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