Listeria newyorkensis: OTR81_13930
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Entry
OTR81_13930 CDS
T08875
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
lnw
Listeria newyorkensis
Brite
KEGG Orthology (KO) [BR:
lnw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lnw03036
]
OTR81_13930 (smc)
Chromosome and associated proteins [BR:
lnw03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
OTR81_13930 (smc)
BRITE hierarchy
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
WAO21341
LinkDB
All DBs
Position
2850945..2854505
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AA seq
1186 aa
AA seq
DB search
MLLKRLEMNGFKSFADKMVIDFVPGTTAIVGPNGSGKSNITEAIRWVLGEQSAKSLRGGR
MGDVIFAGSDSRKPINFAEVSLVFENEDRFLPLDYSEVSVTRRIFRNGDSDYLINKQSCR
LKDIVDLFMDSGLGRESFSIISQGKIDEILNSKPEERRSIFEEAAGVLKYKHRKKQAENK
LFETEENLNRVQDILYELEGQLEPLEMQASVAKDYLFQQEELEKYEVTLLVAEIEAFTEK
IAVQKAEFAKNGEILTAMQAEIKQEEAQIFAQKQMLADMDAQMDATQAELLVVTERLEQL
EGKRNVALERKKHSNENEQAMHENLQQLEAKIKTFEAQKQVLLQDKLEKETALEVFLKEK
KVLEAKLAEYSNLSEEKIENMKSDYIELRHTQTTMKNDIGYLERQLSQMQGRSEKLDHEN
QQHITERNEIIANVEILKKHVDEMRTKLADQMTHYQEIQQELAKQEAVFTKQERDMYRQY
ETIQQAKSRQETLAELADDYAGFFQGVREVLKAKKKLNGIMGAFVELVEIPEHYQKALEI
ALGANAQHIIVRDDQAAREAISYLKQTRAGRATFLPLTTIQPRQIPMATKHSLEQQPAFV
ALASDVLTYDAQVENVILNALGTTILAKDLKGANVLAKLVNFRYRVVTLEGDVVNAGGSM
TGGATAQGKSSIMTRKHELENLSKTIAQMTVSVAKTEKQFAALKEEVKGKREQLEEARSI
GESLRLQETELLGKKERAEERLAVANKQLQIYDMEKEEGTSEHQQLTERKEKLQQELTVL
ALEIIDKDEEIQRMTKQSKEQEHNRASDQESYSTLKSRVAVSREQLQTAEQALLTLETDM
ADYYNQKEAITSKLAMLQSNLETVHTSTEELAEIIDNARIEKEQAATKRDQLREKRTALQ
ESLAVQEEALQQKHNQASFYMEQKTTAEVSLSRLDADVDNRLERLSEAYVLTFEAAKERM
VEDMDIDNARSKVRLLKRSIDELGVVNIGAIDEFERIKERFDFLNGQQADLLEAKSTLFQ
VMDEMDEEMKKRFEASFTAIQAEFAIVFPELFGGGQARLILQNPDEVLTTGVDIEAQPPG
KKLQNLSLLSGGERALTAIALLFAIIRVRPMPFCILDEVEAALDEANVTRFSRYLKKFET
NIQFIVITHRKGTMEEADVLYGVTMQESGVSKLVSVRLEETAELIK
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgttattaaagcgattagaaatgaatggtttcaagtcatttgctgataaaatggtaatt
gattttgtgccgggcactacagcgatagtaggcccaaatggaagtggaaaaagtaatatt
accgaggcgattcgctgggtacttggggagcaatctgccaaaagccttcgcggtggccgg
atgggtgacgttatttttgctggaagtgattcgcgaaaaccgattaattttgcggaggtt
tcgcttgtttttgagaacgaagatcgttttttaccgcttgattatagtgaggtttcggtg
acgagacgtattttccgtaatggagatagcgattatttgattaataagcagtcatgtcgt
ctgaaagatatcgtggatttgtttatggattcaggccttggacgcgagtcgttttcgatt
attagtcaagggaaaattgatgagattttaaatagcaagccagaggaacggcggtcgatt
tttgaagaagcggcgggcgttttgaagtacaagcatcggaagaaacaagcggaaaacaag
ctttttgaaacggaagagaacttgaaccgggtgcaggatattttatatgagctggaaggg
caattggagccgcttgagatgcaggcgagcgtggcgaaggactatttattccagcaggaa
gagttggagaaatacgaagtgacgctactcgtggctgaaattgaagctttcacggaaaaa
atcgcggtccaaaaagcagaatttgcgaagaatggcgagattttgacggcgatgcaagcg
gaaattaagcaggaagaagcgcagattttcgcgcagaagcagatgctcgcggatatggat
gcgcaaatggacgcgacgcaagcggaacttctcgttgtgacggaacgcttggaacaactg
gaagggaagcgaaacgtggcgctagagcggaagaaacatagcaatgagaacgagcaggcg
atgcatgaaaacctgcagcaactcgaagcgaaaatcaagacgtttgaagcgcagaaacaa
gtgcttttgcaagataagctagaaaaagaaaccgcgctcgaagttttcctgaaagaaaag
aaagtgctggaggccaaattggcggagtatagcaacttgtcggaagaaaaaatcgagaac
atgaaaagcgattatatcgagttacgccacacgcaaacaacgatgaaaaatgatattggt
tatttggagcgtcagttgtcgcagatgcaaggtcgttcggagaaactggatcatgagaat
cagcaacatattacagaacggaacgaaattattgcgaatgtcgaaattttgaagaagcat
gtggacgaaatgcggactaaactggcggatcagatgacgcattatcaggagattcagcag
gaattggcgaagcaggaagcggtgttcacgaagcaagagcgtgatatgtatcggcaatat
gaaacgattcaacaagcgaaatcgcgtcaggaaacattggcggagcttgcggatgattac
gctggatttttccaaggtgttcgtgaagttttgaaggcgaagaagaagttgaacgggatt
atgggcgcgtttgtggaattggtcgagattccggagcattaccagaaggcgcttgagatt
gcgcttggtgcgaacgcccaacatatcattgtgcgtgatgatcaagcggcacgtgaagcg
attagctatttgaaacaaacgcgggctggacgggcgacgttcttaccgctgacaacgatt
caaccacgccaaattccaatggcaacaaagcacagtttagagcaacaaccagcgtttgtc
gcattggcaagtgatgtgttgacgtacgatgcccaagtggaaaacgtgattttgaacgcg
cttggtaccaccattttggcgaaggatttaaaaggcgcgaacgtactcgccaaattggta
aacttccgctatcgtgtcgtgacgttggaaggcgatgtcgtgaatgctggcggttccatg
accggtggagcaacagcgcaaggcaagtcatcgatcatgacgcgaaaacatgaattggaa
aacttgagtaaaacgattgcacaaatgacggtatctgttgcgaaaacggagaaacaattt
gcggcattgaaagaagaagtaaaaggaaaacgagagcagttggaagaagctagatctatc
ggcgaatcgttgcgtttacaggaaacggaattgctcggtaaaaaagaacgcgcggaagaa
cgcttagccgtcgcgaacaaacagcttcaaatttacgatatggagaaagaagaaggcaca
tcagagcatcaacaattgaccgaacggaaagagaaattgcaacaagagttgacggtgctg
gcgctggaaattatcgataaagacgaagagattcagcggatgacgaagcaaagtaaagaa
caagaacataatcgtgcgagcgatcaggagagctattctacgctgaaatcccgtgtggca
gtcagtcgtgaacagcttcagacggcggaacaagctctgttgacgctggaaaccgatatg
gctgattactataaccaaaaagaagcgatcacgtcgaagctggcgatgctccaatcgaat
ctggaaacggtgcatacgagtacagaagagctagcagaaatcattgataatgcgcgtatc
gagaaagaacaggccgcgacgaaacgcgaccaattacgcgaaaaacggacggcattacaa
gagagcttggcagttcaagaagaagcgttacagcaaaaacataatcaggcaagtttctac
atggagcaaaaaacaaccgcagaggtcagcctaagccgtttagacgcagatgtagacaat
cgtttagagcgcctatcagaagcttatgtgctcacgtttgaggcggctaaagaacgcatg
gtggaagatatggatatcgataacgcacgatccaaagtccgtctattaaaacgctcgatt
gatgagcttggcgtggtcaatattggcgccatcgatgaatttgagcggattaaagaacgt
tttgatttcctaaatgggcaacaggctgatttactcgaagctaaatccacgttattccaa
gtgatggacgagatggacgaagagatgaagaaacgatttgaagcgtctttcaccgcgatt
caagctgaatttgcgattgttttccccgagctttttggtggtggacaggcaagacttatt
ttgcaaaatccggatgaggtcttaacgacaggcgttgatatcgaagcgcaaccaccaggc
aagaagttgcaaaatctgagtctactttcgggtggagagcgtgcgctaactgcgattgct
ttattatttgccattattcgcgtgcgaccgatgccattctgtattttggatgaggtggag
gcggcgctggatgaggcaaatgtgacgcgtttcagtcgttatttgaagaaatttgagacg
aatattcagtttatcgtcattacccaccgcaaaggcacgatggaggaagcggacgtgttg
tacggtgtaacaatgcaggaatccggtgtttcgaagctcgtttcggtacgcttagaagaa
accgcagaactaatcaaatag
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integrated database retrieval system
