Loa loa (eye worm): LOAG_00323
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Entry
LOAG_00323 CDS
T02664
Name
(RefSeq) PAB-dependent Poly(A) specific ribonuclease subunit
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
loa
Loa loa (eye worm)
Pathway
loa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
loa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LOAG_00323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loa03019
]
LOAG_00323
Messenger RNA biogenesis [BR:
loa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
LOAG_00323
mRNA degradation factors
3'-5' decay
Pan complex
LOAG_00323
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
PB1
Motif
Other DBs
NCBI-GeneID:
9937691
NCBI-ProteinID:
XP_020304136
LinkDB
All DBs
AA seq
653 aa
AA seq
DB search
MQSGSGNGASSDLFSGYEQHPPPPGSRLAQYLHGNSTQQAPRPSNWANRMPPNQATMAGP
YTFSNHPTSHSSNLPHFTSSFAAMGLSDEKENPSLSSLSYGFPTSSQRSLNYSNVTQALT
VSPIMHDPMRPSSHISQENCGSTTANYMQENFGGTTYFFTPTTTNSTIADGQSSVPQKDD
RVYVTTNGNFVYHGPLPHIGKYKPPRGLSYFTPPELKMELLQRQLAIQCRAEPLLYPDIP
QNVEYFQNLVPLENVKFVGGHMERGIIGSHITTVYKAINGRDGMPYCLRRIHNFRVNAMK
QLSLADNWKKLMHVNVVQLRDVIQTRQFGDHSLLFAYDYHPLSETLKNRHLNRLNGSSKL
GPIANLPGSGPVVQESLMWSYIVQLSSALRAIHSAGMAARTVDPSKIIVFDKTKVMLSSC
GILDVINPGSDHTIQLYQQDDLNGLGRVLIALAMGSLHATRRENISNSMSIINQQCTTDL
KNIITLLLQASTQRPHSINEVMPMIGARFYAQLETTQMKNDLLENELSKELENGRLFRLL
CKLNTITERAEFQMDMSWSETGDRYLLKLFRDYLFHQITETGKPWIDMAHIVTSLNKLDA
GVNEKIQLVSRDGENVLVVSYTDLRRCLENAFSELQNRPPSIPNPLLPVVGHP
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcggaagtggaaacggtgcaagttctgatttgttcagtggttatgagcagcat
ccgccacctccaggttcacgtctggcgcagtatttgcatggaaacagcacccagcaagca
cctcgaccttctaattgggctaaccggatgccaccaaatcaggcgaccatggcgggtcct
tataccttcagcaatcatcctacttcgcattctagcaatctgccgcactttacatcatct
tttgctgcaatggggttgagtgatgaaaaagaaaatccatcattatcgtctctgtcttac
ggttttccaacatcctcgcaacgatcgcttaactactctaatgtaacacaagctttgact
gtctctccgataatgcacgatccaatgagaccaagcagtcacataagtcaagaaaattgt
ggttcaactactgcaaactatatgcaagaaaatttcggtgggacaacctatttcttcaca
ccaactacaacaaattccactattgctgatgggcagtcatctgttccacagaaagacgat
cgtgtatatgtgacaacaaatggtaattttgtgtatcatggtccattaccacatattggc
aagtataaaccaccacgaggactttcatatttcacaccacctgaactaaaaatggagctg
ttgcaacgacaacttgctatacagtgtcgcgcagaaccattactttatcctgatatccca
caaaatgtcgagtatttccagaatctggttccacttgaaaatgtcaaatttgtgggtggt
catatggaacggggaatcatcgggtcacacatcacaacagtctataaagcaatcaatgga
cgcgacgggatgccttattgtttaaggcgaattcataattttcgagtgaatgcaatgaaa
cagctatcattagctgataactggaaaaaattaatgcatgtaaacgttgtgcaactaaga
gatgttatacagactcgtcagtttggcgatcactcgctgctttttgcctatgattatcac
ccgctctcggaaacgttgaaaaatcggcatctaaatcgactcaatggttcttcaaaatta
ggaccaattgcaaatctccctggaagcggtccggtggtgcaagaatctttgatgtggtcc
tatattgtgcaactttcatcagcccttagagctatacactccgctggtatggctgcacga
actgttgacccatccaaaatcattgttttcgataaaaccaaagtgatgttgagcagctgc
ggcattctagatgtcatcaatcctgggagtgaccatacaatacaattataccagcaagat
gatctgaatggtcttggtcgtgtgctgattgcattagcaatgggttctctgcatgctaca
cgtcgtgaaaatatcagcaatagcatgagtattatcaatcagcagtgtaccaccgactta
aagaatattattacacttttgttgcaagcttcaactcagcgcccacattctatcaatgaa
gtgatgccaatgattggtgctcgtttctatgcacagcttgaaacaactcaaatgaagaat
gaccttctggaaaacgaattatcgaaagaattggaaaatggacgtttgtttcgactgtta
tgcaaattaaatactataactgaacgagcagagtttcaaatggatatgtcatggagcgaa
acgggtgaccggtatttgttgaagctattccgagattatttgtttcatcaaataactgaa
actggtaaaccgtggatcgatatggcacatattgtcacttccctgaataagctagacgct
ggtgttaacgagaaaattcagttagtttcacgtgatggtgaaaatgtgcttgtggtatcg
tacacagatttacgacgatgtctggaaaatgctttcagtgagctgcaaaatcggccacca
tcaataccgaatccactattgccagtagttggtcatccctaa
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