Loa loa (eye worm): LOAG_00736
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Entry
LOAG_00736 CDS
T02664
Name
(RefSeq) RNA helicase
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
loa
Loa loa (eye worm)
Pathway
loa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
loa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LOAG_00736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
loa03041
]
LOAG_00736
Enzymes [BR:
loa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LOAG_00736
Spliceosome [BR:
loa03041
]
Complex A
U2 snRNP components
U2 related factors
LOAG_00736
Complex B
LOAG_00736
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
ThiI
Motif
Other DBs
NCBI-GeneID:
9938098
NCBI-ProteinID:
XP_003136324
UniProt:
A0A1S0UAM3
LinkDB
All DBs
AA seq
952 aa
AA seq
DB search
MGSHEKHSSRSSRDKIDSKKHRSPKREKIRRDRSRSPRDKRTKDRSRSPRKRDRSRSRDR
SDRDGKRDKKKDRDLDLGEIVAMTDKNEAERKLEVEMQKRRERIEKWRLERKKGEVTASD
EGTSKVEGRQQQEKKWTLDNEEEDEESTPQEIEKKESDDDEIDPLDAFMSEVNKEVRASK
YGLEQNNEGKVRIVVIKSDANLEPKKGEIIEAEDEIEPVIDDFDIEKAASSLIAKGRQLP
QTDHSKVYYRPFRKNFYVETAELAKITKKEVDEYREELDIRVRGKNCPKPVRSWAQCGVE
WKILSTLKKLEYKKPTPIQSQAIPAIISGRDVIGIAKTGSGKTLAFLLPMFRHILDQPEL
EEMDGPIAVIMSPTRELAMQTWKEANKFAKQLDIRVACVYGGVGISDQIGDLKRGAEVVV
CTVGRLTDMLAANKGKVTNLRRVTYLVLDEADRMFDMGFEPQVMKIVNNIRPDRQTVLFS
ATFPRQMEALARKILDKPIEIMVGGKSVVCDDVNQNVVILEEHQKMLKLLELLGVYWENG
NVLVFVDKQEKADDLVTQLMRSGYNCAPLHGGIDQFDRDSTILDYKAGKIKLLVATSVAA
RGLDIKKLILVVNYDCPNHYEDYVHRVGRTGRAGNKGYAYTFILPTGQERMAGEVCRAFE
TAGKEPPEQLKKMWEDYKAHMAAEGKTVHIGGCGFSGSGYKYDQAEDEKEATRRKVTRLM
HGMENAVDDDDDDEIEQQLSSMMKGKRRIVEGHTFGGASSGAGVAGDKLEKARAMAAKIA
EAKQLGVTAPVEKDAASLTAEAVMRGSDAVPIALSAKSIAKQKAEQLNERLNYIPSELIP
GVETETELQYFEEEIEINDFPQQIRYKICSRDSLAQVQEYADVGISVKGSYYPGNKEPKD
GERKLFLFLEARSELALRRAREEILRIMKDTVRQMAQTGTRNASTTGRYKVF
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgggttcgcacgaaaaacacagttcacgcagcagccgggataaaattgattcaaaaaaa
catcgttcaccaaaacgcgagaaaattcgtcgcgaccgaagtcgctcaccgcgggataaa
cggacgaaggatcgcagcagatcaccaaggaaaagggaccgaagtcgttctcgggatcga
tctgatcgtgatggtaaaagggataaaaagaaggatagagatttggacctgggtgaaatc
gttgccatgacggataagaatgaagctgaaagaaaattagaagttgaaatgcaaaagcgt
cgtgaaagaattgaaaagtggcgcttggaacggaagaaaggggaagtaacggcaagcgat
gaaggtacttcgaaagtagaggggcggcagcaacaggagaagaaatggacattggataac
gaagaagaagacgaagaaagtacgccacaggaaattgaaaaaaaagagtcagatgatgat
gaaattgatccactggatgcctttatgtctgaagtcaataaagaagtccgtgcctcgaaa
tatggactagagcagaataatgaggggaaagtccgcatagttgtcatcaagtcagatgca
aatttagaaccgaagaagggcgaaatcatcgaagcagaagacgaaatcgagcctgttatt
gacgacttcgatattgagaaagcagcttcatcattaattgcgaagggaaggcagttaccg
cagactgaccattctaaggtgtattaccgccctttccgtaagaatttttatgtggaaact
gctgaactggcgaaaataacgaagaaagaagtagatgagtaccgagaagaactggatata
cgtgtgaggggtaaaaattgtccaaaacctgtccgatcatgggctcaatgtggtgtcgag
tggaaaattttaagtactttaaaaaagctagaatacaagaaaccgacaccaatccaatct
caagcaattccggcaataatcagtggtcgtgatgtcattggtattgctaaaactggtagt
ggtaaaacacttgccttcttgctaccaatgtttagacacatactagaccaaccagaactg
gaagaaatggatggtcctattgctgtaataatgtcaccgacacgggagcttgctatgcag
acgtggaaggaagctaataagttcgctaaacagctagatatccgtgttgcatgtgtttac
ggtggtgtcggaatatctgatcaaataggagatttgaaacggggggccgaagttgttgtg
tgtactgttggacgtcttacggatatgcttgctgcgaataaaggtaaagtaacaaatttg
cgacgggtaacatatctcgtacttgatgaggcagacagaatgttcgatatgggattcgag
ccacaagtgatgaaaattgtaaataatatacgccccgatagacagacagttctgttctct
gcaacatttccgcggcaaatggaggcacttgcaagaaagattttggataagccaattgaa
ataatggtaggaggcaaaagcgttgtttgtgacgatgtaaatcaaaatgttgtaattctg
gaagaacatcaaaaaatgctaaaacttttggaattactcggtgtttactgggaaaatggg
aatgtcttggtgtttgttgacaaacaagagaaagcagatgatctggtcacacaactaatg
cgcagtggctataactgcgccccattacatggtggcattgatcagttcgatcgtgactca
acaatacttgactataaagccggtaaaattaaactcctagtggcaacatcagtggctgca
cgtgggttagatatcaagaaactgatccttgtggtcaattatgattgtccaaatcattat
gaggactatgtgcatcgtgttggtagaacaggaagagcaggcaataaaggatatgcttac
actttcattttaccaaccgggcaggaacgcatggcaggcgaagtatgtcgagctttcgaa
acagctgggaaggaaccaccagagcaactgaaaaagatgtgggaggactataaggcacat
atggcagcagagggaaaaactgtccatattggtggttgtggattttctggaagtggttac
aaatatgatcaggccgaagatgagaaggaagcaacgcgaagaaaagttacgcgtttaatg
catggcatggaaaatgctgtagatgatgatgatgatgatgagattgagcaacagcttagt
agtatgatgaagggcaaaagacgtatcgtcgagggtcacacttttggtggtgcatcctca
ggcgcaggagttgcaggagacaaattagagaaggcgcgagcgatggcagcaaagattgct
gaagcaaaacagcttggggttaccgcaccagtcgaaaaagatgctgcctcgttgacagcc
gaggctgtcatgcgtggtagtgatgcggtaccgatagcattatcggcgaaatcgatagcg
aagcaaaaagcagagcagttgaatgaacgcttaaattatattccgtcagagttaattcca
ggagtcgaaacagaaacggaattgcaatactttgaagaggaaattgaaattaatgatttc
ccgcagcaaattcgttataaaatatgttccagggatagtttagctcaggtgcaagaatat
gctgacgtcgggatttctgtgaaaggatcttattacccaggtaataaggagccaaaagat
ggtgagaggaagctgttcctatttttggaagcacggtctgagcttgcattacggcgtgcg
cgtgaagaaattttaaggatcatgaaggatacagtacggcaaatggcgcaaacaggtaca
cgaaatgcttcaacaacaggaagatacaaagttttttaa
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