Loa loa (eye worm): LOAG_02354
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Entry
LOAG_02354 CDS
T02664
Name
(RefSeq) transcription factor Tfb2 family protein
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
loa
Loa loa (eye worm)
Pathway
loa03022
Basal transcription factors
loa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
loa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LOAG_02354
09124 Replication and repair
03420 Nucleotide excision repair
LOAG_02354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
loa03021
]
LOAG_02354
03400 DNA repair and recombination proteins [BR:
loa03400
]
LOAG_02354
Transcription machinery [BR:
loa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
LOAG_02354
DNA repair and recombination proteins [BR:
loa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
LOAG_02354
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
9939739
NCBI-ProteinID:
XP_020303621
UniProt:
A0A1S0U750
LinkDB
All DBs
AA seq
486 aa
AA seq
DB search
MFQMSNWNGHPLLEYLSSRAIDQLDKLYSSPAVSFAIFRLLPELSQQFILKTVWLTGTNR
KCEWHAWSAPDMETAVMNQISGLRKLKIIVGDEEVMLNPVYRRSYLKATRIGLCKASELS
AVTDCDEKTRKSANKDLGKKAVERWECILHYLALPSQKSEQGVSGTTKRLFRSAGLTSSE
NDDGDIEITSAGFQFLLLNRSEQIWTYLLYYFHMQEVAGIDIIKELDFLFRLTLYSGDTS
GGTRVTNGSDKERPAGSRAFLIDECWPEPTKDFLMHLRELGLVFIRKRKDGFFFLTPLLN
HLTSISYASETGIENRNQNGFVIVETNYRVYAYTDSNLQLAILSTFTEMLYRFNDMSVGV
LSREAVRRAFQVGITAAQIIAFLRANAHPTTYAVTTEYGGMIQSVPITVADQIRLWEDER
RRLMFCNAAVYSSFESEKEYFGLKGYVSSQGILLWCDDVQRLMVITEEGHESVKSWWKMK
TGKNGS
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaatgtcgaattggaatggacatccactactggaatacctgagcagccgcgcc
attgaccaactagataagctctattcatctcctgcggtatcgtttgctatttttcgactt
ttaccggagctttcacaacagtttatcctgaagacagtatggttaactggcactaatagg
aagtgcgaatggcatgcgtggtcagctccagatatggagacggcagtgatgaatcagatc
agtggattgaggaagctgaagataattgttggagatgaagaagtcatgcttaatcccgtg
tatcgtcgttcataccttaaggcaactcgtattggattatgcaaagcatcagaacttagt
gcagttacagactgcgatgaaaaaactcgaaaatcggcaaataaagatctcggaaaaaaa
gcggttgaaagatgggaatgcatattgcattatttggcattaccgtctcagaaaagtgaa
caaggtgtcagtggtaccaccaaaaggctttttaggtctgcgggattaactagcagtgaa
aatgatgacggtgatatagaaataacatcagccggtttccaatttcttttattgaaccgt
tcggagcaaatttggacctatctcttatattattttcatatgcaagaagtagccggtatc
gatatcatcaaggaacttgattttttattcagattaaccttatattctggtgatacatct
ggtggtactagagtgaccaatggttcagataaagaacgacctgccggtagtcgggcattt
cttatcgacgaatgttggcctgaacctactaaggattttttgatgcatctcagggagttg
ggattggtttttataaggaaacgaaaagacgggtttttctttctaactcctttactcaat
catttgaccagcatttcctatgcatctgaaacaggcatagaaaaccgtaatcaaaacggc
tttgtgatagtggaaacaaactatcgtgtttatgcatacacagattcaaacttgcaactt
gcaatactttcgacatttacagaaatgctttacagattcaatgatatgtctgtgggtgtg
ctgtctcgtgaagccgtaagaagagcttttcaggttggtataacagcagcacaaattata
gcatttctgcgtgcaaatgctcatccaacaacctatgctgtaacaactgaatacggagga
atgatacagagtgtacccataactgtcgccgatcagatacgactttgggaggacgaaagg
cgacgtttgatgttctgcaatgctgctgtttattcgtcatttgaatctgaaaaggagtat
ttcggtttgaaaggatacgtcagttcccaaggtatcttgctatggtgtgatgatgtacag
aggttgatggttattacagaagaaggacatgaaagtgtgaaatcgtggtggaaaatgaaa
actggtaaaaatggttcataa
DBGET
integrated database retrieval system
