Loa loa (eye worm): LOAG_02698
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Entry
LOAG_02698 CDS
T02664
Name
(RefSeq) ATP-dependent RNA helicase cgh-1
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
loa
Loa loa (eye worm)
Pathway
loa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
loa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LOAG_02698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loa03019
]
LOAG_02698
03036 Chromosome and associated proteins [BR:
loa03036
]
LOAG_02698
Enzymes [BR:
loa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LOAG_02698
Messenger RNA biogenesis [BR:
loa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
LOAG_02698
mRNA degradation factors
5'-3' decay
Decapping complex
LOAG_02698
Chromosome and associated proteins [BR:
loa03036
]
Eukaryotic type
Gene silencing
piRNA pathway
LOAG_02698
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
9940081
NCBI-ProteinID:
XP_020303523
UniProt:
A0A1I7VGJ6
LinkDB
All DBs
AA seq
432 aa
AA seq
DB search
MTSKTESQSDQSWKENLNLPAKDLRFKTTDVTDTKGIEFEDFCLKRPLLMGIFEKGWEKP
SPIQEASISIALSGQDILARAKNGTGKTGAYCIPCIDKVDVEKKYPQSLIIVPTRELAFQ
TSNICVDLSKHMNLKVMVTTGGTELRNDIMRLNGTVHIIVATPGRILDLMDKNVADMSHC
TTLVLDEADKLLSQDFQGILDRVIKFLPPDRQIMLYSATFPLTVATFMQKHMRNPYEINL
MEELTLVGVTQYYAYVQEKQKVHCLNTLFRKLQINQSIIFCNSTQRVELLAKKITEIGYS
CYYIHSRMAQGHRNRVFHDFRKGACRNLVCSDLLTRGIDIQAVNVVINFDFPRNAETYLH
RIGRSGRFGHLGIAINLITYEDRFTLRRIEAELRTRIAPIPKSVDPKLYVAEYQIVDENG
SEMVGSSKETAA
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcaaaacggagtcacagagtgatcagtcttggaaggaaaaccttaatttgccg
gctaaagatctgcgcttcaagacaacggatgtgacggatacaaaaggtattgaatttgag
gatttttgcttgaagcgaccgttattgatggggatttttgagaaaggttgggaaaagcca
agtccgatacaggaagcatccatttcaattgctttatcaggtcaagatatattagcacgc
gcaaagaacggtacaggtaaaacaggtgcctactgtatcccttgtattgacaaagtcgat
gtcgaaaagaaatatccgcaatcattgatcattgtaccaacgagggaactagcattccaa
acctctaatatttgtgtcgacttgagcaaacacatgaatttgaaggtaatggttactacg
ggaggtacggaacttcgtaacgatatcatgcgtctgaatggtactgttcatattattgtg
gcaactcctggccgtattcttgatcttatggataagaatgttgctgatatgtcgcactgc
acaacgctggtattggatgaagctgataaactgctttctcaggatttccaaggcatttta
gatcgtgtcatcaaatttctaccgcccgatcgacaaattatgctctattcggcaacattt
ccactgacagtggcaacattcatgcagaagcacatgagaaacccatatgaaattaatctg
atggaagaattgacactggtcggtgttacgcagtattatgcctatgtgcaagaaaagcag
aaagtgcattgcttgaacacgttgttccgcaagcttcaaatcaaccagtccataattttt
tgtaattcaacgcaacgtgtggaacttttggcaaagaaaatcacagaaataggctattcc
tgctattacatccattcacgtatggcacagggtcatcgtaatcgagtttttcacgatttt
cgtaaaggagcttgtcgtaatttggtctgctctgatttgcttactagaggtatcgatatt
caggccgtaaatgtagtcatcaattttgatttcccgcgcaatgccgaaacatacttgcat
cgtattggacgttcgggtcgcttcggacatctcggtattgcgatcaaccttatcacttac
gaagatcgctttactcttcgacgtattgaagctgagctaaggactcgcattgctccaatt
ccaaagtcggtggatccgaaactctacgttgccgaatatcagatcgttgatgagaatggt
agcgaaatggttggatcttccaaggaaacggctgcctag
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