Loa loa (eye worm): LOAG_03146
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Entry
LOAG_03146 CDS
T02664
Name
(RefSeq) hypothetical protein
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
loa
Loa loa (eye worm)
Pathway
loa03018
RNA degradation
loa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
loa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LOAG_03146
09123 Folding, sorting and degradation
03018 RNA degradation
LOAG_03146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loa03019
]
LOAG_03146
03041 Spliceosome [BR:
loa03041
]
LOAG_03146
Messenger RNA biogenesis [BR:
loa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
LOAG_03146
mRNA degradation factors
5'-3' decay
Lsm complex
LOAG_03146
Spliceosome [BR:
loa03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
LOAG_03146
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
9940539
NCBI-ProteinID:
XP_003138731
UniProt:
A0A1I7VSM1
LinkDB
All DBs
AA seq
111 aa
AA seq
DB search
MKDSGILYFFTSFFCSSFPNMSNSTSSNPSTLLPLELVDKCIGSRIWVIMKGEKEIVGTL
TGFDDYVNMVLEDVVEYENTVDGKRVTKLDTILLNGNHITMLVPGGEGPEV
NT seq
336 nt
NT seq
+upstream
nt +downstream
nt
atgaaggattctgggattttgtactttttcacttcttttttttgttctagctttccaaat
atgtcgaattctacatcatcgaatccgtcaacgttactaccattggaattggtagacaaa
tgtattggttccaggatctgggttattatgaaaggtgaaaaggagattgttggaacgttg
acaggttttgatgattacgttaatatggtactagaagatgttgtggagtatgaaaataca
gttgatggtaaaagagtaacgaagttagataccattttgctgaatggtaatcatatcaca
atgttggtacctggaggtgaaggtcctgaagtttaa
DBGET
integrated database retrieval system