Loa loa (eye worm): LOAG_03297
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Entry
LOAG_03297 CDS
T02664
Name
(RefSeq) hypothetical protein
KO
K12830
splicing factor 3B subunit 3
Organism
loa
Loa loa (eye worm)
Pathway
loa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
loa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LOAG_03297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
loa03021
]
LOAG_03297
03041 Spliceosome [BR:
loa03041
]
LOAG_03297
03036 Chromosome and associated proteins [BR:
loa03036
]
LOAG_03297
Transcription machinery [BR:
loa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
LOAG_03297
Spliceosome [BR:
loa03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
LOAG_03297
Complex B
LOAG_03297
Complex C
U2 SnRNP specific factors
LOAG_03297
Chromosome and associated proteins [BR:
loa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
LOAG_03297
TFTC complex
LOAG_03297
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_EML
Tape_meas_lam_C
Motif
Other DBs
NCBI-GeneID:
9940684
NCBI-ProteinID:
XP_003138882
UniProt:
A0A1S0U595
LinkDB
All DBs
AA seq
1197 aa
AA seq
DB search
MYLYNLTLQGSSAINQAIHGSFCGLPKQQEVCIARGNLLQLLFCDPKTGKIHILCSHNAF
GIIRSLLAFRLTGGTKDYIVVGSDAGRIVILEYNTQKVCFERVHQETFGKTGCRRIVPGQ
FLAIDPKGRAILIGAVERQKLVYIMNRDASANLTISSPLEAHKSHCICYSVVGVDVGFEN
PTFACLEVDYEEVDHDSTGHLATKIPQTLTFYELDLGLNHVVRKYAEPLVDKGNILISVP
GGQDGPSGVIVCCENYLVYKNLGDQPDIKCPVPRRRNELDDCDRTVIIVCAATHKTKLMY
FFLVQTDQGDIFKVTLESEHDIVTELKIKYFDTIPVSNAMCILKTGFLFTASEFGNHHLY
QIAHLGDEDDEPEFSSRMQLEEGETFFFAPRGLTNLAVVDQMDSLSPLISSYIDDLANED
SPQIYTLIGRGALSAVKVLRNGLEVTEMAVSELPGNPNAVWTVKRNIDDKFDSHIVVSFV
NATLVLSIGETVEEVTDSGFLGTTPTLGCALIGDDALLQVYPDGIRHIRADRRVNEWKAP
GKRTIMKCALNRRQVAIALAGGELVYFELDVTGQLNEYTERRELPADVLCMSLSEIPEGE
LRSRFLTVGLADKTVRIISLDPQDCLSPLSMQALPSEPESIIVLEMFGTETQSASTVHLN
IGLQNGCLLRTTVDQVTGELTDNRTRYLGTKSVKLFHVRIQSKDAIMAASSRAWLLYDYQ
SRFHLTPLSYAALEFAAGFSSEQCPEGIVAIAENTLRILSLEKLGAVFNHVVHPLDYTPR
RMVVHKASGNLIIIENDHAAFTVKGKMERRKQLADELMEVAKEAEEADQQAVKEMADAIR
KWASTVRVMRSNDGETLSHFPFAEDEAAFAIAMVQFQNQSDTQFVLVGCGCELQLKPRKA
NGGCIYTFLLAANGTTLQLLHRTATDEVVNAIHDFRGMALAGVGKKVRLYDLGKRKLLAK
CENRQIPTQVVDIRSMGQRIVVSDSQESVHFMRYKKQDGQLSIFCDETSPRYVTCVCLLD
YDTVAVGDRFGNIAVLRLPKGVTEEVQEDPTGVRALWDRGNLNGASQKLEAIAHLYIGDA
ITSMQKTSLVPGANDCLCYTTISGIIGILVPFMSRDEFEFFQNLEMHMRVEYPPLCGRDH
LAYRSYYFPVKSIIDGDLCEQYSLMPLDKQKSVGEELGRKSTEIHKKLEDIRTRYAF
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgtatttgtacaatttaacactacaaggttcgtcagcaatcaatcaggcaattcatgga
tctttctgcggattaccaaaacagcaggaagtatgcattgctcgcggcaatcttctgcag
ttattgttttgtgatccgaaaacaggaaaaattcatattttatgcagtcataatgctttc
ggtattataagatcattgttggcttttcgtttaactggtggaaccaaagactacattgtt
gttggttcggatgctggacgtattgtaatcctggagtataatacccagaaagtatgtttt
gaaagagttcaccaggaaacattcgggaaaactggctgtcgccgaattgttccaggacaa
tttcttgctattgatccgaaaggacgtgcgatcctgattggggctgtggagcgtcagaaa
ttggtatatattatgaatcgggatgcatcggcaaatttaacaatcagttcgccactggaa
gcacataaatctcattgcatctgttatagtgttgttggtgtggatgtcggatttgaaaat
cctacttttgcatgtttagaagttgattacgaggaagttgatcacgattctaccggacat
ttggctacgaaaattccacagacattaacgttttatgaattggatcttggtttgaatcac
gtagttcgcaagtacgctgaacctttggttgataagggaaatattctgatttcagtacct
ggtggacaagatggacctagtggtgttattgtttgttgcgagaattatcttgtttataaa
aatctgggtgatcaaccagacattaaatgtccagtaccacgaagaagaaacgaattggac
gattgtgatcgcaccgtcattattgtttgtgccgcaacacataagacaaaattgatgtac
tttttcttggtacaaaccgatcagggtgatattttcaaagttacactggaaagtgaacat
gacattgtcactgaacttaaaatcaaatattttgatacgataccagtttcaaatgccatg
tgtattttgaaaacgggatttttgtttactgcaagtgaattcggaaatcatcacttatat
cagatagcacatttgggtgacgaagatgatgaacctgagttttcatcgcgaatgcagttg
gaagaaggtgaaacattcttttttgctcctcgtggactcacgaatttggcagttgtcgac
cagatggatagcctatcaccgcttatttcttcctacattgacgatttggctaatgaagat
tctcctcaaatttacactttaataggacgtggcgcactttctgcagtcaaggtgctacgc
aatggcttagaagtaacagaaatggctgtctctgaattgcctggtaatccgaatgcagtt
tggacagtgaaacgaaacattgatgataaatttgattcccatatcgttgtttccttcgtt
aatgcaacactcgtattatctattggtgaaactgtcgaagaagttacggattctggcttt
cttggtacaacaccgacacttggctgtgcacttattggcgatgatgctttattgcaagtg
tatccagacggtattcgacacattagggctgatcgacgagtaaatgaatggaaagcacct
ggtaaacgtacaattatgaaatgtgcgctgaatcgaaggcaagtagcaatcgcacttgcc
ggtggtgaactcgtctactttgaacttgacgtgactgggcaactgaacgaatacaccgaa
cgacgtgagctgcctgctgatgtcctatgcatgagtttaagtgaaattcctgaaggggag
ttacggtctcgttttcttacagtaggcttggctgacaaaacagtacgaattatatccttg
gatccacaagattgtctttcaccacttagtatgcaagcactgccatcagaaccggaatca
attattgtgctggaaatgtttggcaccgaaacacagagtgcatcaactgttcatttgaat
attggtttgcagaatggctgcttgcttcgaaccactgtggaccaggttacaggtgaacta
accgataacagaactcgctatctggggacgaaaagtgtaaagttgtttcacgtaaggata
caaagtaaagatgcgatcatggccgcatcatcacgagcttggcttttgtacgattaccag
agcagatttcatcttacccccctttcatatgcagctctggaattcgcagccggtttttca
tcggaacaatgtccagaaggaattgtagctatcgcggaaaatactttgaggattttgtcg
cttgaaaagttgggagccgtttttaatcatgttgtgcatccactggattatacacctcgg
cgtatggtagtgcataaagcatccggaaatctgattataattgaaaatgatcatgccgct
ttcacggtaaaagggaaaatggaacgtcggaaacagcttgctgatgaactaatggaagta
gcaaaggaggcagaagaagcggaccagcaagcagtgaaagaaatggctgatgcaattcgg
aaatgggcttcgacagttcgagttatgcgcagtaatgatggtgaaacgctttcacatttt
cctttcgctgaggatgaagctgcatttgcgatagcgatggtgcagtttcagaatcaaagc
gacacacagtttgtgttggttggttgtggttgtgaattacaattgaaacctagaaaggca
aacggcggatgcatttataccttcctgctagcagctaatggcactacacttcagctgcta
cacagaacggcaactgatgaagtggtaaatgctattcatgattttcgtggaatggcgtta
gctggagtagggaaaaaagtacgactgtatgaccttggtaagaggaaattgcttgctaaa
tgtgaaaacagacaaatacctacacaagttgttgacatccgatcaatgggacaacgtata
gttgtaagtgattcgcaggaatcggtgcatttcatgcgttacaaaaaacaggatggtcag
ttatcgatattctgcgatgagacatctccacgttacgtaacatgtgtctgtctgctggat
tatgacacagttgcggttggagatcgttttggaaatattgctgtgttgcgattaccgaaa
ggtgtaactgaagaggtgcaagaagatcctactggtgtacgtgcgctatgggatcgagga
aatctgaatggagcttcacaaaaattggaagccatagctcacctctatattggcgatgcg
ataacatcaatgcagaagacatctctagtcccaggtgcgaacgactgcttatgttataca
acgatttcaggaattattggaattttggtaccattcatgtccagagatgaatttgaattt
ttccaaaaccttgaaatgcatatgagagtggaatatccaccgctttgtggtcgtgatcat
cttgcatatcgttcctattacttccctgttaagtcaattatcgatggtgatctttgcgaa
cagtactcattaatgccattggataagcagaaatcggttggcgaagaactgggaaggaag
tcgactgagattcataagaagttggaagatatccgaactcgttatgcgttttaa
DBGET
integrated database retrieval system