Loa loa (eye worm): LOAG_03335
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Entry
LOAG_03335 CDS
T02664
Name
(RefSeq) MutS domain III family protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
loa
Loa loa (eye worm)
Pathway
loa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
loa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LOAG_03335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
loa03400
]
LOAG_03335
DNA repair and recombination proteins [BR:
loa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
LOAG_03335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
Motif
Other DBs
NCBI-GeneID:
9940725
NCBI-ProteinID:
XP_003138920
UniProt:
A0A1S0U500
LinkDB
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AA seq
879 aa
AA seq
DB search
MDKLDKGLMKIIGNKASGTVVIFERNEFYACYEDDAIFIANSIFCSEVGLRRCRIGETEL
MYHVLNNAQYLRVVHDVILVQHYRVEVYAANDGQWELKAKGSLGCLNDFEEIVGDSAELY
ELTTVAALTVTEGHDSSECLVSVVSCNVREMQLTIAEFLDTEHFVNLEKCLAALVPRECL
LVSDKMGISSVSLCGENNQLNTALKKAGIRKELFQFSEQLPTTLSNHITEMIDPKYKDIR
LSRAQKNCLVGLIQHLHLNDDGVMSGKFQLRNYKSAGYMYLNSAAVKALELFAACQEDED
LLDDVGSLYELLNKCRTPQGQRLLRDWIRRPLHDIRKINERLDVVEALVNNSLCRAILHD
DILRRIPDITTITRKLLQKKAGLQECYRLYQIIRLLKRFHQVLDELHASCGSLASSVNDL
CLEPLALAQLQFEKFMALIESTVDVAYFKENGLYRILPNIDENLLAVAERMDEIETKCNA
LLKKVCSGITEAVKLENTEHHGFHFRVTLKAEKSIRQSDMRILETSKGSGVHFTCDDLDI
LNREYLKLSSHYEAIQSSFIDMVVETCSGYVSTFCELSETVAIIDTLVALSILASGSPFC
FVRPQILDEDKQILELRKCRHPVMEANPNSSQFICNDVILGREQGDGAMFLVLTGANMGG
KSTYLRCCALSVLLAQIGSFVPCESARFSLIDGIHTRIGSCDYQCKGVSTFMAEMNDCAS
ILESATCHSLVIVDELGRGTSTYDGFGLAWAIAEDIVSRVKCFCIYATHYHELTRLSRVY
PKQLKNVCTASQIDENGQLILLYKIIPGVAGRSFGLNIGKMIGLPNSVLQTASDMLERLE
ARDSKLSSDEEELYKKIHSFGDDELRQQVLDNLMSEESD
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggataaactggataaaggtttgatgaagataattgggaataaagcgtcgggaactgtt
gtcatttttgagcggaacgaattttacgcgtgctatgaagacgatgcgattttcattgca
aacagtattttttgcagtgaagtgggtcttcgtcggtgcagaattggtgaaaccgaatta
atgtatcatgtcttgaataatgcgcagtatttacgtgtagttcatgatgttatcttagtg
cagcattatcgtgtggaggtgtatgctgcaaatgatggacaatgggaacttaaagcgaag
ggttcactgggatgtctaaatgattttgaagaaattgttggtgacagtgctgaattgtac
gagcttacaacagttgcggcgttaactgtgacagaaggacacgattccagcgaatgtttg
gtttctgttgtgtcatgtaatgtccgagaaatgcagcttacaatcgccgaatttcttgat
actgagcatttcgtgaatttagagaaatgtttggctgcattggtacctcgagaatgtttg
ctggtttcggataaaatgggaatatcatctgtcagtttatgcggtgaaaataatcagctg
aatacagcgctaaaaaaggctggtatcaggaaggaactctttcagtttagtgagcaactt
cctactacgctttctaatcatatcactgaaatgatcgacccgaaatataaggatattcgc
ctttcaagagcgcagaaaaattgtcttgtggggttgatccaacatttgcatttgaacgat
gatggagtgatgagtggaaaatttcaattacgaaattataaatcggcaggttacatgtat
ttgaattcagctgctgtaaaagctctcgaattgttcgctgcatgccaagaagatgaagat
ttattggatgatgtaggttcactttatgaattgttaaataaatgtcgcactcctcaagga
caacgtcttttacgtgactggattcggcgacctttacatgatatacgcaaaattaatgaa
cgattggatgtagttgaggctcttgtcaataattcattgtgtcgtgctatacttcatgac
gacatcttacgtcgaatacctgatattacaacaattaccagaaaactgctacaaaagaaa
gcaggcctacaggaatgttatcggctttaccagatcatccgtctgctgaaacgattccat
caagtattagacgaacttcatgcttcttgtggttccttggcatcatcggtcaatgattta
tgcttggagccgcttgctctagcacagttgcagtttgagaagttcatggcactgattgaa
agtactgttgatgtagcttatttcaaggaaaacggattatataggatcttaccaaatatc
gatgaaaatttgctagcagttgctgaaagaatggatgagattgaaacgaaatgcaatgct
ttgttaaaaaaggtttgttctggaataaccgaagcagtcaaactcgaaaacactgaacat
catggtttccattttcgagtcactttaaaggccgaaaagtcaattagacagtcggatatg
cgcattcttgaaacaagtaaaggttccggtgtacattttacttgcgacgatctggatata
ctaaatcgtgaatatctaaaactttcttctcattacgaagcaattcaaagtagctttatc
gacatggttgttgaaacttgttctggttatgtttcaacattctgtgaattatctgaaaca
gtcgctataattgatactttggttgcactttctatattggccagcggatctcctttttgt
tttgttagaccacaaatacttgacgaagataagcaaattctggaactcagaaagtgtcgt
catccagttatggaagcgaatccaaattcctcacagtttatatgcaatgatgtgattctc
ggccgggaacaaggagatggtgcaatgtttttagtattgacaggagcaaatatgggaggc
aaaagtacatacttacgttgttgtgcactttctgttcttttggcacaaataggctcattt
gtaccatgtgagagcgccagattttctcttatagatggcatccatacaaggataggcagc
tgcgattatcagtgtaaaggagtttctacatttatggcagaaatgaatgattgtgcatca
attctcgaatcggcaacatgtcattcgttggttattgttgatgagttgggacgtggtaca
tcaacatatgatggtttcggattagcttgggcaattgcagaagatattgtttcgcgggtg
aaatgtttctgtatatacgctacgcattatcatgaactgactagactaagccgtgtttat
ccgaagcagttgaaaaatgtctgtaccgcctctcaaattgatgaaaatggacagctcatt
ttgctttataagataataccaggtgttgcgggtcgttctttcggcttaaacattggtaaa
atgattggtctgccgaatagcgttcttcagacggcaagcgacatgttggagagattggaa
gcaagggattcgaagttaagttcagatgaagaggaactatataagaagattcacagtttt
ggagatgatgagctgcgacaacaagtgctggataatttgatgagtgaggaaagcgactag
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