Loa loa (eye worm): LOAG_03556
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Entry
LOAG_03556 CDS
T02664
Name
(RefSeq) hypothetical protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
loa
Loa loa (eye worm)
Pathway
loa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
loa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LOAG_03556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
loa03400
]
LOAG_03556
DNA repair and recombination proteins [BR:
loa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
LOAG_03556
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_II
MutS_IV
Ribonuc_2-5A
Motif
Other DBs
NCBI-GeneID:
9940947
NCBI-ProteinID:
XP_003139141
UniProt:
A0A1S0U4F9
LinkDB
All DBs
AA seq
1204 aa
AA seq
DB search
MAMKKQASLLSFFTRSPNPKSALQEEPIANKTTKIVRRTTPSKISRMQKNGNVESDIRME
DDTKNLHTKRPPDEELSSLKKSCTKRRRVVVSSDSEDNDVEMVNLNKSEENMQQSPRYRS
LKSGLLSHLNSPRRENISSQTSSVYESTSSKPVVSEMTISFINSFRASEQDSSVSSSKLG
CSTDGDVLDESASTACLTTVPDIESVRFPHLDFEFLQPDRIRDADKRLRSHPDYCPRTLY
VPDAFMKKQTPGHRQWWAAKSAYFDTILFFKVGKFYEMYHMDAVIGVENLNLNYMRGSFA
HCGFPEVAYGRFADQLVNRGYKVARVEQTETPTQLESRNKIEKANDKVVRREVCNITTPG
TRTYGVLDGNDEQSTVDVMDTTARYLYAVAERGTESVQYGVCFIDTTVGRFYIGCLSDGS
NRSALRTLFSHYQPAQILYERGRVSASTMTVYNSTVSAVPKEALFPKKEFLTSEDTLKLL
ADDKYFGKLYDKWPVVLLDMIDRDSLIPKCNPAYDACVSALGAIIWYLRRCFVDVDMISM
RRFELYKPMNLTGPLSHDKDEIEVGVHYWRGRRLILDSLTLKHLNIIPPIGSMKKFAPRD
PITTKYTLYNVINKCATPAGKRLLRQWVCAPVCDQEILSSRQDAIEWLSEARLKGFIDKA
RERLCKVPDLERLVQKIHTLGLKYRAEEHPDSRAQMFETMRYNKRKIRDLVRALEGFEHI
QDLRLKFMENFGESQKPVPALLERCFGYRFPDISNDLEHFKNAFNRDKAQEEGIIVPEKG
VIKEYDDTIYNVKECIHELDLYLNVIRRQLHCSNINFFGSGRSRYQLEIPEGIAMNLSHE
FELKSSRKGYKRMVTDELVNLVKNLDEAENQLDILRRDLMRRVFADFGDRSIKWTMVVER
MAVFDVLLSLTLYGQDCGLNMCRPQFIYDSKLPVLEIKSGYHPSLAAIAASGSSFTYIPN
SVLLGGNQPSTILLTGPNMGGKSTLMRQVGVLVVLAQIGSFVPADEMKLSPVDRIFTRMG
AGDRITAGQSTFYVELYETNLILRNATKHSLVIMDELGRGTSTYDGTAIAYAVLLDMATR
LNCRTFFSTHYHGLCKAVQNISSIKAAHMACIVENENAEDPTMENVTFLYTLTDGICPKS
YGFFAAKISGLKTEVIRAAFAASRHLDEGKTRKGRMAELRKLALNEECSTAQLREIIHSM
LVSS
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atggctatgaagaagcaagcatctctactttcattttttaccagaagtccaaatccgaaa
agtgcattgcaagaggaacccatcgcaaataaaacgaccaaaatagtgaggcgtaccacc
ccttccaagatttcaagaatgcaaaagaatggtaatgtggaaagtgatatccgaatggaa
gatgacactaaaaacttgcatacgaagcgaccaccagatgaagagctatcatcattaaaa
aagtcatgcacgaaacgtcgccgcgtggtggtttcatcagattcagaagataatgatgtt
gaaatggtaaacttgaacaaaagtgaggaaaacatgcagcaaagtccacgatatagatca
ctgaagagcggtttgctgtcccatttgaattcacctcgtcgtgaaaatatttcttcgcag
acttcatcagtatacgagtccacatcttcaaagcctgttgtgagtgagatgaccatatcg
tttatcaattcattccgcgcttcagaacaagattcatctgtgtcgtcatcaaaactaggt
tgttcaactgatggcgatgtattggatgaaagcgcatctactgcatgtttgactactgtg
cccgatattgaatctgtgcggtttcctcatttagacttcgaatttttacaaccagaccgc
attcgcgatgcagataaacgtttacgtagtcatccagattattgtccgcgtactttatat
gtaccggatgcattcatgaaaaagcaaacgcctggacatcgacagtggtgggcagctaaa
tcggcgtactttgatacaatattgttttttaaagttggaaagttttatgaaatgtatcat
atggatgctgttattggcgtcgaaaatttaaatctcaattacatgaggggtagttttgcg
cattgtggatttccagaagtagcttacggtcgttttgccgatcaactggttaatcgagga
tataaagttgcccgcgtcgaacaaaccgaaacaccaacgcaattggaaagccgaaataaa
atcgaaaaagctaatgacaaagttgtgaggagggaagtgtgcaatattactactccaggt
actcgaacatatggagtacttgatggaaatgatgaacaaagcactgtggatgtgatggac
acaacagcacgttacttgtacgctgtagcagaaaggggtacagaaagtgtacaatatggc
gtctgttttatcgatacaaccgtcggtcgattttacattggctgcctctcagacggcagt
aatcgttctgctctaaggacattattctctcattatcaaccagctcagattttatatgag
cggggacgagtttcggcgtcaacaatgactgtatataatagtaccgtgagtgcggtgccg
aaggaagcgctatttccgaagaaagaatttttaacatccgaagacactttgaaattgctg
gcagacgataaatattttggcaaattatacgataaatggcctgtagtcttactcgacatg
attgatagagacagccttattccaaagtgtaatcctgcgtatgatgcttgtgtttcagct
ttgggagctatcatttggtatttaagaagatgctttgttgatgttgatatgatttcaatg
cgaagatttgagctgtataaacctatgaatcttacgggacctctttcccatgataaggat
gaaatagaagttggtgtacactactggcgcggacgccgtcttattctggatagccttact
ttgaaacatctaaatatcataccgcctattggttctatgaagaaatttgcaccgcgtgac
ccaatcaccacaaaatatacgctttataatgttattaataaatgtgctactcccgcaggt
aaacgtcttcttcgacagtgggtttgcgctcctgtttgcgatcaggagatcttatcttca
cggcaggatgcaatagaatggctttccgaagcgaggttgaagggatttattgataaagcc
agggaacgcttatgcaaagtacctgacctggaacgcttagttcaaaaaatacatacatta
ggattgaaataccgtgcggaagaacaccctgacagccgagcgcagatgtttgaaactatg
cgttataataaacgaaaaattcgagatttggtccgggctttggaaggtttcgaacatatt
caagatctacgtctaaaatttatggaaaattttggcgagagtcaaaaaccagtccctgca
ttattggaacgatgctttggatatcgatttcccgatatctcaaatgatcttgaacatttt
aaaaatgcattcaatcgtgataaagcacaagaagaaggtattattgtgccagaaaaaggt
gtaattaaggaatacgatgatacgatttataacgtaaaggaatgcatccatgaattggat
ttgtatttgaatgtcatcaggaggcaactacattgttcaaacatcaatttctttggaagc
ggacgatcccgttatcagctcgaaataccagaagggatagctatgaatttgagccatgaa
ttcgaacttaaatcctctcgaaagggctacaaacggatggtaacagatgaattggtaaac
ttggttaaaaatctggatgaagctgaaaatcaacttgatattttacgacgtgaccttatg
cgacgcgtattcgctgattttggcgacaggtctatcaaatggacaatggttgttgaacgt
atggctgtattcgatgtgcttctttctttaactctttatggtcaggattgtggtctaaat
atgtgtcgtccgcagtttatttacgatagtaagctgccagtattagaaatcaaatccgga
tatcatccgtcgcttgccgcgatagctgcttcagggagcagtttcacatacataccaaac
agtgttttactgggaggaaatcaaccatcgacaattttgctgacaggtccaaatatgggt
ggaaaatcaacactaatgcgtcaagttggtgtgctggttgtgcttgctcaaataggcagc
tttgtacctgcggatgaaatgaaattgtcaccagttgatcgaatctttacaaggatgggt
gcaggtgatcgaattactgcaggccaatctactttctatgttgaattatatgaaacgaat
ttgattttgcgaaatgcaactaaacattcccttgtcataatggatgaactaggtcgaggg
acaagtacttatgatggcaccgctattgcatatgcagtgctgctggatatggcaaccagg
ctgaactgtcgtacttttttttctacccattatcacggcttatgtaaagcagttcaaaat
attagcagcatcaaagcagcacatatggcttgcattgttgaaaatgaaaatgccgaagat
ccaacgatggaaaatgttacgttcctgtatacgctaacagatggaatatgtccaaaatct
tatggattctttgctgcgaaaatttcgggactcaagacagaggttattcgagctgcattt
gctgcttcacgacatcttgatgaaggaaaaacacgaaagggacgtatggcggaattacga
aaacttgcattgaatgaggaatgtagcacagcacaacttagagaaataattcattcaatg
ttggtttcatcgtaa
DBGET
integrated database retrieval system