Loa loa (eye worm): LOAG_03919
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Entry
LOAG_03919 CDS
T02664
Name
(RefSeq) procollagen
KO
K06237
collagen type IV alpha
Organism
loa
Loa loa (eye worm)
Pathway
loa04382
Cornified envelope formation
loa04512
ECM-receptor interaction
loa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
loa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
LOAG_03919
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
LOAG_03919
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
LOAG_03919
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
loa04147
]
LOAG_03919
00536 Glycosaminoglycan binding proteins [BR:
loa00536
]
LOAG_03919
Exosome [BR:
loa04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
LOAG_03919
Glycosaminoglycan binding proteins [BR:
loa00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
LOAG_03919
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
9941315
NCBI-ProteinID:
XP_020303211
UniProt:
A0A1S0U516
LinkDB
All DBs
AA seq
1794 aa
AA seq
DB search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NT seq
5385 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattatttttagcagacaacatgtcgagattgcacaaacagaggatgcttctgcg
ttggcgagaaaggaaggtatgccaggacctcaaggtcctccaggtgcacaaggtatacga
ggatttcccggtcctgaaggtcttccaggacctaaagggcaaaaaggttcacaaggcccg
ccaggaccaccaggaatgaagggtgatcgaggattgattggtgtacccggcttcccgggg
aatgatggcgcaaatggacgaccaggagaaccgggtccgccaggtccacctggttgggat
ggttgcaacggaaccaatggagctcccggtgttccaggtttacctggaccacccggtatg
cccggttttccaggcacaccaggtattccaggaccgaagggtgaaccagctatcggatat
gctggagctcccggagaaaaaggtgacgcaggaatggcaggaatgccaggcttgccagga
ccacctggacgagatggattccccggaatgaaaggcgatcgtggtgatattggcccagct
ggaccgcgaggaccacctggtgaggttggtatgcctggaaatccaggtatcggaagtata
gggccaaaaggagagcccggagatcttggtcagccaggaccaccaggtccacctggaccg
cgggaattcactggttcaggttctatcgtagggccacgtggtatacaaggagaaaaaggt
atgaagggcgatcaaggacctcgaggtttaccgggtcttccaggtccggtgccatcaact
ggtgccaaaggtacaatcattggtccgcagggttccccaggaatgaagggagagaagggt
gaacctggagaacctggggcacgtggatacccgggaaatgctggtgcaccaggacaaccg
ggttttcctggtatgaaaggtgaaaaaggattgtcaggaccagcaggaccacgaggcaaa
gaaggacgacctggtttgccaggtccacccggtttcaaaggtgatcgtggattggatggt
ttaccgggtgtgcctggtttacctggtcaaaagggtgaaccaggatttccgggtcgagat
ggaccaaaaggagttcgtggtccacccggaccaccaggaggtggtgactttacggacgga
ccaccgggaccacctggattaccgggacgagaaggtcaacctggcccaccaggtgttgat
ggttatcctggaccacctgggccaccaggtccccaaggaccaccaggtgggcctggactt
ccaggtttacctggtttagaaggattgccaggaccaaaaggatcgaaaggtgacgctggt
atcccaggggcacctggagtacctggaccaccaggattgcccggatcacgaggacctaag
ggagaacctggaccacgtggtgctgatggaaaaagtattccgggtttaccaggaaaagat
ggtagacctggtttagatggtttgcccggaaggaaaggagaaatgggattgccaggtgtt
cgaggtcctgctggtgattcgttgaacggacttcctggtccaccgggtccgcgaggacca
ccaggacccaaaggttatgatggacgagacggtgccccaggtttacctggtttacctgga
caaaaaggtgaacgtggtggatcatgttcaatttgtgttcctggaatgaaaggagaaaaa
ggttcggatggttatccaggcttgccgggaccgcaaggcgaaagaggattaacaggagtg
ccaggtgatcaaggtcctcctggagatgatggtatgcctggtgcaccaggaaggcctggt
ccaccaggaccacctggaaaagacggcattcctggtttgccagggcaaaagggtgaacca
acacatatggtgcttcgaccaggaccaccaggatatccaggtcaaaaaggtgaagctggc
ttcccaggcttgcctggacaaatcggactaccagggaagcctggcccacctggtttgcca
ggattaccaggaataccaggaccaaagggtgaaccgggttttccggggttgacaggaaaa
cctggcaaagatggacttccaggtctgcctgggttgaaaggagctccaggttacggcttg
ccaggattgccaggacttccgggtcagaagggtgaagcgggtattcccggtctaccggga
gctcaaggacctgttggaccgatgggaccacctgtagctgaaagtcaactgaaaccagga
cctccaggaaaagacggattgccgggattgccaggcccgaaaggtgatgctggttatcct
ggtgcacctggaaaagaaggtgttccaggacttccaggtttgccgggaccaaaaggtagt
gaaggtatgccggggccaccaggtatcgatggtcaacctgggctacctggaccaaaagga
aatgctggaaaacctggcctacccggtttgcaaggtccgaaaggtgaaagaggatatcca
ggatcaccaggattaccaggagctaaaggagaaccaggactgtctatgacgggaccacca
ggtcctcccggatttcctggactgaaaggaaacgacggtttaccaggagcaccaggactt
ccaggtcctgaaggaccacgcggtttgccaggtgtatcaggcttgaagggagaagctggt
cttccaggtgcacctggaattgcaggtttacctggtcaaaaaggcgatgcaggattcccg
ggacttccaggagcagaaggtccagtagggccgcctggcatagcaggagctccaggtttt
ccaggacaaaaaggtgaagatggactaccgggtttgccaggtgttgcgggtttgaagggt
gaagcaggacttcctggggctcctggtcttccgggagcagccggacaaccaggatttcca
ggacttaaaggacaagcaggacttccaggaataccaggtgcaaagggagacgctgggttg
ccaggtctaccgggagctcctggagctaaaggtgaacgaggattggctggcttgcctggt
ctgccaggaatgaaaggtgcatcgggttaccctggtgcacctggtaaagatggccttcct
ggtatcccaggtgcaaagggcgaacgtggtttcaatggacttccaggagaaaagggcgaa
cccggacctgcagcaagagatggtgcaaaaggtgacgctggtttacctggagcaccaggt
ttacgaggacctcaaggaccacctggattaccaggactaccaggaataaagggtgaagcc
ggaaaaccaggttacggtgcacccggattgccaggagaaaagggtattcctggtctgcct
ggaaaacaaggaagacaaggtgcacctgggcaaaaaggacttgatggcgcgccgggattt
ccaggacttaagggcgatgcaggtctccctggagcaccaggaattccaggacaaattgga
ttacccggcctaccaggacaaaaaggtgaagcaggctttccaggtcaatctggacttcct
ggagcacccggtttgcctggtaaaatgggcgtacctggaatccgaggtgacaaaggagtt
ccaggcatacctggagcaccaggtgatcgcggtttggatggtcttccaggacagaaagga
gaacctggattgccaggattgcaaggtccaatgggtccacctggtcctaagggcaatata
ggagctcctggttacccaggtataaagggattgccaggatttcctggaaaagacggattg
ccaggtctcccaggaattaagggtgaagttggaatgcaaggagcacctggaaaggatgga
tttcctggaatacctggacaaaaaggtgaagctggcttacctggcttacctggcttacct
ggcaagttttttccgttacttattaaaaatgccatacacggaaatcattgtgcgtcaatt
gctgggccaaaaggcaatgctggggcatcaggtcttccgggcaaggatggccttcctgga
ttacctggaatgaaaggtgaaccaggactgtcaggatatcctggagcatcaggagtgaaa
ggagaagctggattacctggaatcccgggagctaaaggagaaccaggactaccgggacta
ccaggtttgcgtggaaaagatggacttcctggagcacctggtatagccggattaccaggc
ataccaggtgcaaaaggtgatgctggactaccgggtgctcctggtgtacctggtcaacca
ggtttacttggattgaaaggagaaccaggtcttcccggatttccgggtccgaaaggtgaa
gcaggtataccaggaaaaccaggattaccaggactaccaggtttaaaaggtgactgtggt
gtccctggagtaccgggtcgagacggtgccccaggcaaaattggcgaaccaggaccgatg
ggtcctccaggagctgaaccgttaacactgcgtggtgagaaaggtgatcaaggaccaatg
ggtgtgccgggtatccgaggcgagaaaggacttcctggtttggatggtttaccaggacca
agcgggccaccaggaccaccaggattgaaaggagcagatggtttcccaggactacctggc
ttacccggtgaaaaaggagcacctggtttgcccggctttccaggtgtagaaggtacacca
ggaccaccaggacttccaggatcaggtggaccaccaggcgcaccaggacccgcatacagg
gatggattcttactcgtcaaacacagtcaaacaactgaagtacctcagtgtccacaagga
cagcagaaactgtgggacggttattctctgctctatatcgagggcaatgaaaaatcacat
aatcaagatcttggtcacgcgggttcatgtttgacgagattttcaacgatgccatttttg
ttctgtgacttcaacaacgtctgtaattatgcatctcgtaatgataaatcatactggtta
tcaacaacagctccaataccaatgatgcctgttaatgagcaaggtatcgagccatatatt
tcaagatgtgctgtatgcgaagcaccagcaaacgttattgcggttcactctcaaactatt
caaataccaaactgtccaaatggatggaactcactttggatcggttactcatttgctatg
cataccggtgcgggagcagaaggtggtggtcaatctttgagctcacctggttcatgtctt
gaagattttcgagcaacacctttcattgaatgtaacggtgctcgaggtagctgccattat
ttcgccaataaattcagtttttggcttacaacaattgaagatgatcaacaattcaggatc
ccagaaagtgaaacactgaaatcgggaagtttacgaacacgggtctcccgatgtcaagtg
tgcataaaagctacagattcgagccgatttccatacaagcagtag
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integrated database retrieval system
