Loa loa (eye worm): LOAG_04686
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Entry
LOAG_04686 CDS
T02664
Name
(RefSeq) replication factor C
KO
K10755
replication factor C subunit 2/4
Organism
loa
Loa loa (eye worm)
Pathway
loa03030
DNA replication
loa03410
Base excision repair
loa03420
Nucleotide excision repair
loa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
loa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LOAG_04686
03410 Base excision repair
LOAG_04686
03420 Nucleotide excision repair
LOAG_04686
03430 Mismatch repair
LOAG_04686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
loa03032
]
LOAG_04686
03036 Chromosome and associated proteins [BR:
loa03036
]
LOAG_04686
03400 DNA repair and recombination proteins [BR:
loa03400
]
LOAG_04686
DNA replication proteins [BR:
loa03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
LOAG_04686
DNA Replication Termination Factors
ELG1-RFC complex
LOAG_04686
Chromosome and associated proteins [BR:
loa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
LOAG_04686
DNA repair and recombination proteins [BR:
loa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
LOAG_04686
Check point factors
HRAD17(Rad24)-RFC complex
LOAG_04686
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_22
Rep_fac_C
AAA_24
AAA_16
AAA_assoc_2
AAA_11
RuvB_N
TIP49
RNA_helicase
Mg_chelatase
IstB_IS21
AAA_28
DUF815
SLFN-g3_helicase
AAA_5
nSTAND3
DNAX_ATPase_lid
AAA_30
AAA_19
Gp44_lid
AAA_7
ResIII
AAA_25
AAA_18
ATPase_2
AAA_33
Motif
Other DBs
NCBI-GeneID:
9942088
NCBI-ProteinID:
XP_003140271
UniProt:
A0A1S0U3B2
LinkDB
All DBs
AA seq
308 aa
AA seq
DB search
MDAFLNQSKKQDNASTTLMEIPWVEKYRPRKVEEVAFQNEVVSVLKKVLEGADLPNLLFY
GPPGTGKTSAAIALCRQLFRNTETYHDRVMEMNASDERGINIVRNKIKEFARRAVSSHLP
DGSPVVGLKVIILDEADAMTTPAQAALRRTMEKESRTTRFFLICNYITRIIDPLTSRCAK
FRFKSISSESQGKRLEWICQNENIEFDPLAIDELIELCDGDMRKSVTALQTISSCHKKLL
PSDVRQFLGAIPDDVVERFLTACRSCNHDQLYACVESIRREGYGVYQLLKQFFYICLHLE
DLTDLKKL
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggatgcctttttaaatcaatcaaaaaagcaggataatgcttcgacaacattaatggaa
attccttgggttgagaaatatcgtccacggaaagttgaggaagtagcttttcaaaatgaa
gttgtatcggtgctgaaaaaagtcttggaaggagctgatttaccaaatttattattttat
ggaccgccaggaactggtaaaacatcagcagctattgcattgtgccgacaattattccgt
aataccgaaacatatcatgatcgagttatggaaatgaacgcatccgatgaacgaggcatt
aacatcgttcgcaacaaaataaaagaatttgctcgacgagctgtttcatcacacttacca
gatggaagtcctgttgtgggtttaaaggtaattatactggatgaagcagatgcaatgact
actcctgcccaagcggctttacgacgaacgatggaaaaagaatcacgcactactcgtttc
ttcctcatatgtaattatatcactagaataatagatccactcacttctcgttgtgccaaa
tttcggttcaaatcgatttcatcggaaagtcagggaaaaagacttgaatggatttgccaa
aatgagaacattgagtttgatccgctggcgatcgatgaattaatcgaattatgtgatggt
gatatgcgaaaaagtgtcaccgcattacagacaatatcatcgtgtcataaaaaattactt
ccaagtgatgtacgacaatttcttggagctataccggatgatgtggtagagcgattctta
actgcatgtagatcttgtaatcatgatcagttgtatgcatgcgtagaaagtatcaggcga
gaaggatatggcgtttatcagttgctgaaacaatttttctacatatgcttacatctcgaa
gaccttaccgatttaaaaaagctatga
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