KEGG   Loa loa (eye worm): LOAG_04686
Entry
LOAG_04686        CDS       T02664                                 
Name
(RefSeq) replication factor C
  KO
K10755  replication factor C subunit 2/4
Organism
loa  Loa loa (eye worm)
Pathway
loa03030  DNA replication
loa03410  Base excision repair
loa03420  Nucleotide excision repair
loa03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:loa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LOAG_04686
   03410 Base excision repair
    LOAG_04686
   03420 Nucleotide excision repair
    LOAG_04686
   03430 Mismatch repair
    LOAG_04686
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:loa03032]
    LOAG_04686
   03036 Chromosome and associated proteins [BR:loa03036]
    LOAG_04686
   03400 DNA repair and recombination proteins [BR:loa03400]
    LOAG_04686
DNA replication proteins [BR:loa03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    LOAG_04686
  DNA Replication Termination Factors
   ELG1-RFC complex
    LOAG_04686
Chromosome and associated proteins [BR:loa03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    LOAG_04686
DNA repair and recombination proteins [BR:loa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     LOAG_04686
  Check point factors
   HRAD17(Rad24)-RFC complex
    LOAG_04686
SSDB
Motif
Pfam: AAA DNA_pol3_delta2 RCF1-5-like_lid Rad17 AAA_22 Rep_fac_C AAA_24 AAA_16 AAA_assoc_2 AAA_11 RuvB_N TIP49 RNA_helicase Mg_chelatase IstB_IS21 AAA_28 DUF815 SLFN-g3_helicase AAA_5 nSTAND3 DNAX_ATPase_lid AAA_30 AAA_19 Gp44_lid AAA_7 ResIII AAA_25 AAA_18 ATPase_2 AAA_33
Other DBs
NCBI-GeneID: 9942088
NCBI-ProteinID: XP_003140271
UniProt: A0A1S0U3B2
LinkDB
AA seq 308 aa
MDAFLNQSKKQDNASTTLMEIPWVEKYRPRKVEEVAFQNEVVSVLKKVLEGADLPNLLFY
GPPGTGKTSAAIALCRQLFRNTETYHDRVMEMNASDERGINIVRNKIKEFARRAVSSHLP
DGSPVVGLKVIILDEADAMTTPAQAALRRTMEKESRTTRFFLICNYITRIIDPLTSRCAK
FRFKSISSESQGKRLEWICQNENIEFDPLAIDELIELCDGDMRKSVTALQTISSCHKKLL
PSDVRQFLGAIPDDVVERFLTACRSCNHDQLYACVESIRREGYGVYQLLKQFFYICLHLE
DLTDLKKL
NT seq 927 nt   +upstreamnt  +downstreamnt
atggatgcctttttaaatcaatcaaaaaagcaggataatgcttcgacaacattaatggaa
attccttgggttgagaaatatcgtccacggaaagttgaggaagtagcttttcaaaatgaa
gttgtatcggtgctgaaaaaagtcttggaaggagctgatttaccaaatttattattttat
ggaccgccaggaactggtaaaacatcagcagctattgcattgtgccgacaattattccgt
aataccgaaacatatcatgatcgagttatggaaatgaacgcatccgatgaacgaggcatt
aacatcgttcgcaacaaaataaaagaatttgctcgacgagctgtttcatcacacttacca
gatggaagtcctgttgtgggtttaaaggtaattatactggatgaagcagatgcaatgact
actcctgcccaagcggctttacgacgaacgatggaaaaagaatcacgcactactcgtttc
ttcctcatatgtaattatatcactagaataatagatccactcacttctcgttgtgccaaa
tttcggttcaaatcgatttcatcggaaagtcagggaaaaagacttgaatggatttgccaa
aatgagaacattgagtttgatccgctggcgatcgatgaattaatcgaattatgtgatggt
gatatgcgaaaaagtgtcaccgcattacagacaatatcatcgtgtcataaaaaattactt
ccaagtgatgtacgacaatttcttggagctataccggatgatgtggtagagcgattctta
actgcatgtagatcttgtaatcatgatcagttgtatgcatgcgtagaaagtatcaggcga
gaaggatatggcgtttatcagttgctgaaacaatttttctacatatgcttacatctcgaa
gaccttaccgatttaaaaaagctatga

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