Loa loa (eye worm): LOAG_05308
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Entry
LOAG_05308 CDS
T02664
Name
(RefSeq) hypothetical protein
KO
K12587
exosome complex component MTR3
Organism
loa
Loa loa (eye worm)
Pathway
loa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
loa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LOAG_05308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loa03019
]
LOAG_05308
Messenger RNA biogenesis [BR:
loa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
LOAG_05308
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
9942711
NCBI-ProteinID:
XP_003140893
UniProt:
A0A1I7W4I8
LinkDB
All DBs
AA seq
264 aa
AA seq
DB search
MQHSSVKPVPLNNLLKRTENIEVGTSLENASNSFRSIVMQTGALHDQKGTVYVEFGSTKI
ICSVDGPKEITKSADVNPTEGQVYVFLKNISTEGNAVSGSNSSSVSNKEINGTRNAVESA
LRSIVCLELFCKAQIDVEITVLNDDGGVLAASLIASSLALVDSGIQVYDVCVAAHIVMLT
DGRIIVDPSTNSYPFSSIPDSEEFSGNTHLSVTVGMMPSLNQLACCEFVGIAEPHQLRHA
ITVAVESSLKLYPLVRKTLTSNMI
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcaacattcttcggtgaagccggtacccttaaataatcttttaaaacgaacagaaaat
attgaagttggaacaagtttggaaaatgcatcgaattcattccgatctattgtaatgcaa
acaggtgctttgcatgatcagaaaggtacggtttatgttgaatttggttcaacgaaaatt
atttgttcagttgatggtcctaaagaaataacgaaaagtgctgatgttaatccaacggaa
gggcaagtttatgtttttctgaagaatatttcaacggaaggcaatgccgtctcaggctca
aattcttcctcagtttcaaataaagaaatcaatgggacgcgtaatgccgtggaatcggct
ttacgatcaattgtttgtttggagttattttgtaaagcacagattgatgttgaaataacg
gttctcaatgatgatggtggtgttttggcggcttctttaatagcttcttccttagcttta
gtcgattctggtatccaagtttatgatgtttgtgtagcagctcatatcgttatgttgaca
gatggccgtatcattgttgacccgtcaactaactcatatccgttttcttctatacctgat
tcagaggaattctccggaaatacgcatctttcagttaccgttggcatgatgccgtcacta
aatcagttagcatgttgtgaatttgttggcattgcagaacctcaccagttaaggcatgct
attactgtagccgtagaaagttcattgaagttatatccactggtacgtaaaacacttacc
agcaatatgatataa
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