Loa loa (eye worm): LOAG_05334
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Entry
LOAG_05334 CDS
T02664
Name
(RefSeq) small nuclear ribonucleoprotein Sm D3
KO
K11088
small nuclear ribonucleoprotein D3
Organism
loa
Loa loa (eye worm)
Pathway
loa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
loa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LOAG_05334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loa03019
]
LOAG_05334
03041 Spliceosome [BR:
loa03041
]
LOAG_05334
03032 DNA replication proteins [BR:
loa03032
]
LOAG_05334
Messenger RNA biogenesis [BR:
loa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
LOAG_05334
Spliceosome [BR:
loa03041
]
Complex A
U1 snRNP components
Sm proteins
LOAG_05334
U2 snRNP components
LOAG_05334
Complex B
U1 snRNP components
LOAG_05334
U4/U6.U5 tri-snRNP components
LOAG_05334
Complex C
U2 snRNP components
LOAG_05334
DNA replication proteins [BR:
loa03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
LOAG_05334
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
9942742
NCBI-ProteinID:
XP_003140922
UniProt:
A0A1I7VAH5
LinkDB
All DBs
AA seq
138 aa
AA seq
DB search
MTAIGVPIKILHEAEGHVITLETTIGEVYRGKLNEAEDNMNCQMSEVTVTYRDGRTHHLD
NVFIRGSKIRFMILPDMLKNAPMFKNIGRAQKGAVGMGMGDNRDGRGLRGRGTAFRGRGG
PRGNQRGPGGMPRPQFRG
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgattggtgtcccgattaaaattttgcatgaggctgaaggtcatgttattaca
cttgaaacaacgattggcgaagtataccgtggtaaattgaatgaggcagaggataacatg
aattgtcaaatgagcgaagtcacggtgacttatcgggatggaaggactcatcatttggac
aacgtttttattcgtgggtcaaagattcggtttatgattttgccggatatgttgaaaaac
gcaccaatgttcaagaatattggacgagctcagaaaggagctgttggtatgggaatgggg
gataatcgtgatggacgcggtcttcgagggcgtggcactgcatttcggggacgtggtggc
ccgcgtggtaatcaacgtggtccaggtggaatgccacggcctcaattccgagggtga
DBGET
integrated database retrieval system
