Loa loa (eye worm): LOAG_05613
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Entry
LOAG_05613 CDS
T02664
Name
(RefSeq) hypothetical protein
KO
K13114
pinin
Organism
loa
Loa loa (eye worm)
Pathway
loa03013
Nucleocytoplasmic transport
loa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
loa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
LOAG_05613
03015 mRNA surveillance pathway
LOAG_05613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loa03019
]
LOAG_05613
03041 Spliceosome [BR:
loa03041
]
LOAG_05613
Messenger RNA biogenesis [BR:
loa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
LOAG_05613
Spliceosome [BR:
loa03041
]
Complex C
Other components
EJC/TREX
LOAG_05613
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
9943024
NCBI-ProteinID:
XP_003141198
UniProt:
A0A1S0U060
LinkDB
All DBs
AA seq
405 aa
AA seq
DB search
MMELDVLSADISKAYDDLRTIEESIISLSGKERFGAGRRRILDSASRPGNYGFERRDART
VSLDSSGPNKRRLVISAENDLYEGSDKRARYDDREDEAVRRTVQSSVVMPAIETKSRKAA
ISELKGAEKKEVNVRNRRMFSNLLLGTLQRFQMEEKKISSVEKVQAEKQKEVERRLRESE
EEERERLAREKAALLGKRREKERLIKSLQRKKAIIQYAEQKQEHYRKLQNFIQTQAKPPV
FYLPAKHTLRTLELLKVSSKKIDELIEHRRQQMEADLKTPEEKQVDEGESDGEHSETSAA
TRSIAKMNTEDANKPSDSEIGGKKLDDDEVMEREMVGGVSMESSLRDFGEEECMNGDEIK
ESKQLDEDEQETGKDNSRSDSEPPGVEDEIDQDGDSHVAFADEDD
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgatggaattagatgtattaagcgctgatatatcgaaagcatacgacgatttgcgaacc
atcgaggaatcaattatttcactatcgggaaaggaaaggtttggtgcgggcaggcgacgt
attttggattcagctagtcgtcctggcaattacggatttgaaagacgtgatgcacgcaca
gtaagcttggattcttcgggaccgaataaacgtcgtttagttatatctgctgagaatgat
ttatacgaaggttcggataaacgggcacgatatgatgatagggaagatgaagctgtgcga
cgtactgtgcagtcatcagttgttatgcctgcaattgagactaaatcgcgtaaagctgct
atatctgagttgaaaggagcagaaaaaaaggaagttaatgtcagaaatcgtcgaatgttt
tcaaatttactgcttgggaccctgcagcgtttccagatggaggagaagaaaatatcttca
gtagaaaaagttcaggctgaaaagcaaaaggaggttgaaaggcgtttacgagagtcggaa
gaagaagagcgcgaacgattagctcgagaaaaagccgctctgcttggaaaacggcgtgaa
aaagaacgtttaattaaatcattgcagcgaaaaaaagcgattatacaatatgcagagcaa
aagcaggagcattatcgcaaattacagaattttattcaaacgcaggcaaagccaccggta
ttctatttgccagcaaaacacacactgcgaactttggaactgttgaaagtgtcttcaaag
aagatagatgagcttattgaacatcgccggcaacaaatggaagctgacctaaaaacacca
gaagagaagcaagtggatgagggtgaatctgatggggagcattccgaaacttcagcagct
acgcgctccattgcaaaaatgaacacggaagatgcaaacaagccttcagacagtgaaatt
ggtggcaaaaagttggacgatgatgaagtcatggaaagggaaatggtgggaggagtatcc
atggaatcttcattgcgggactttggagaggaagaatgtatgaatggtgatgaaataaaa
gagtcgaaacaactggatgaggacgagcaagaaacaggtaaggataatagtcgtagtgac
agtgagccaccaggtgttgaagatgaaattgatcaggatggtgactctcatgttgcattt
gctgacgaagatgattaa
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