Loa loa (eye worm): LOAG_05940
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Entry
LOAG_05940 CDS
T02664
Name
(RefSeq) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
loa
Loa loa (eye worm)
Brite
KEGG Orthology (KO) [BR:
loa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
loa03016
]
LOAG_05940
Enzymes [BR:
loa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
LOAG_05940
Transfer RNA biogenesis [BR:
loa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LOAG_05940
Prokaryotic type
LOAG_05940
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
PUS7L_N
Lipoprotein_18
Motif
Other DBs
NCBI-GeneID:
9943351
NCBI-ProteinID:
XP_020302709
UniProt:
A0A1S0U0Q0
LinkDB
All DBs
AA seq
549 aa
AA seq
DB search
MEGDFFITEYMSCGRDELKCTIKKLYSDFIVNEITSDGTVLDICLPCTTETIIESKEIEN
SLTDISVISTPEAVTQELVSKIDGLLKDEISVVEIPTEGMDKQKRTIIHDWIRNRYNGLL
DSQTVTSAIRVLISNKRTRKRRTWPVDRPDYVHFTLCKENKDTHYALSVISKFLGIKNTS
FGICGTKDRRALTTQRVSLYRCEIQRLRELNAKLRGIRLTDFTSNSKPCKLGDLWGNRFK
IILRDVHPFSETDLVDRIEDFKSNGFINYFGTQRFGSCAFNTAEIGIAILKKEWEVALKT
ILKPRNAHGSIREALDEWNKSGNASTALKKLTGSQAYATIEGQLLSSLSRNKCDYHGALL
KLTRNTRSLYVHAYQSLLWNKVVTRWVKNRGFRAVAGDLNVQGQKISDFQNEEVALPLIS
GSVEFPDNEVRDWYKEIMAEDGVTIAMFKALEKEWAIGTVMRPLIAKAQDVKYKILTYPE
ARTKLQADLEGDIDSGNIGVGDFHAVALEFSLPSGSYATIALREITRCDMSKLAQMSVAQ
NEKDLTESV
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggagggagatttctttattacagaatatatgagttgcggacgagatgaactgaaatgt
acaataaaaaagttatattcagatttcatcgtcaatgaaataacatcggatggaaccgtt
cttgatatatgtttaccatgcacaacggaaacgatcattgaaagtaaagaaatagaaaat
agcttgacagatataagtgttatctccactccagaagctgtcacacaagagctagtctca
aaaatcgatggtctcctcaaagatgaaatcagtgttgttgaaataccaactgaaggtatg
gataaacaaaagcgtaccattatacatgactggatacgcaatcgatataatggtcttttg
gattcacaaacagttaccagtgcgattcgagttctaatatcgaataagcgaactaggaaa
agaaggacctggccagtagatcgccccgattatgttcatttcacattatgcaaagaaaac
aaggatacacattatgcactttctgtgatttccaaattcttggggataaaaaacacttca
tttggtatttgcggtacaaaggatcgtcgggctcttacaacacaacgagtatcattatat
cgatgtgaaattcagcgtttgagagagcttaacgcaaagcttcgcggcataaggctcact
gattttacttcaaattcaaaaccatgcaaattgggtgatctttggggaaatagattcaaa
atcattttaagagatgttcatccgttcagcgaaactgatttagtcgataggattgaagat
ttcaagtcaaacggttttatcaattattttggaactcagcgttttggatcgtgcgctttt
aataccgctgaaatcggtattgcaattttaaaaaaggaatgggaagttgccttgaaaaca
attttgaaaccacggaatgcacacggaagtattcgggaagctttggatgaatggaataaa
tcaggaaacgcttctaccgctttgaaaaaactcacaggcagtcaggcatatgctaccatc
gaagggcaacttttatcatctcttagcaggaataaatgcgattatcacggtgctctattg
aagttaactcggaatacacgcagtctttatgttcatgcctaccagagcttgttatggaat
aaggttgttactcgatgggttaaaaacaggggatttcgtgcggtcgccggtgatttaaat
gttcaaggtcaaaaaatcagcgattttcaaaatgaggaggtagctttgcctctgatatca
ggatctgttgagtttcctgacaacgaagtccgagattggtataaagaaataatggctgag
gacggcgtaacaatagcaatgttcaaggcattagaaaaggaatgggcaataggcacagtg
atgcgacctcttattgccaaagcacaggatgtgaagtataaaatactgacctatcccgaa
gctaggacaaaattgcaggcagatcttgaaggagatatagattcaggaaatattggagtc
ggcgacttccacgctgtagctttagagttttctttgccttctggttcttatgctaccatt
gctttacgcgaaatcacaaggtgtgatatgagtaaattggctcagatgtctgtggctcaa
aatgaaaaggatttaactgaatctgtctag
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