KEGG   Loa loa (eye worm): LOAG_06008
Entry
LOAG_06008        CDS       T02664                                 
Name
(RefSeq) BSD domain-containing protein
  KO
K03141  transcription initiation factor TFIIH subunit 1
Organism
loa  Loa loa (eye worm)
Pathway
loa03022  Basal transcription factors
loa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:loa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    LOAG_06008
  09124 Replication and repair
   03420 Nucleotide excision repair
    LOAG_06008
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:loa03021]
    LOAG_06008
   03400 DNA repair and recombination proteins [BR:loa03400]
    LOAG_06008
Transcription machinery [BR:loa03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     LOAG_06008
DNA repair and recombination proteins [BR:loa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     LOAG_06008
SSDB
Motif
Pfam: BSD PH_TFIIH CREPT
Other DBs
NCBI-GeneID: 9943416
NCBI-ProteinID: XP_020302690
UniProt: A0A1I7VTS4
LinkDB
AA seq 534 aa
MSNKELLLRVEHVKYRMPGAAKSPIGTFYVYEDRIEWLDNASDEKLVVFFSDIRGQRISP
PNKTKTQLQICKHDEEQATFVFVNPLGKEMHVKDRDLVKEMLQQALIHHRQIVSQNATQS
LKYSKTKELEAKKKILERNKHLQELYKHLVASKLISAQDFWSEYYQNKDADGGKLGVSSG
FLSSIAQSEGTNGVKLNLNIDTIQSIFRTYPAVERKHLELVPHEMTEQEFWAKFFQSHYF
HREREVAPSPSDPFADCIKADNAEMRKLLDTKIAHKTLDFSYIHDDPLINNISSLSEYAS
STKDTLMKRFNYHSERVLLTTAENEVPTVADLEGQMNEESTKIDPKSREEDENEIMLESE
ELRSDKHEEELDLISFAVGGVVRPAKHYTDGQARAYRDIVQRVCEAMPENDDYDDDLEDD
SDSDYEDLLRLATAVTEASGKNITSELTATDLVDLQAIHDSVAELLKHFWMCFPPMNPDM
DEKLKRMNITLRNFEETKIASAEERFGKKNLAHCRQMLSFAYARYDAYLQKKKK
NT seq 1605 nt   +upstreamnt  +downstreamnt
atgtctaacaaggaattattgttgcgtgttgaacacgtgaaatatcgtatgccaggtgct
gctaaatcgcctattggtaccttttatgtttacgaagatcggattgagtggctggataat
gcttcggacgagaagcttgtcgtcttttttagcgatattagaggacagcgaatttcgcca
ccaaacaaaacgaaaacacagctccaaatatgtaagcatgatgaagaacaagcaacattt
gttttcgttaacccacttgggaaggagatgcatgtaaaagaccgcgatttggtaaaagaa
atgttacaacaggcgcttatacatcatagacagatcgttagtcagaatgctacacagtcg
ctgaagtacagtaaaacgaaagagttagaggcaaagaagaagattttagaacgcaacaaa
catttgcaagaactatacaaacatttggttgcgtcgaaactgatatctgctcaagatttc
tggagcgaatattatcaaaataaggatgcagacggcgggaaactgggtgtttcaagtggg
ttcctaagcagcattgcgcaatccgaaggcacgaacggagtcaaattaaatctcaacatt
gatacaattcagagtatattcagaacctacccagcagtagaaaggaagcatctggaactt
gtgccacacgaaatgacagagcaagaattctgggccaagttttttcaatcacattacttt
catcgtgaacgtgaggtagcgcctagtccatccgatccatttgctgactgcattaaagct
gataatgcagaaatgcgtaaactattggatacgaagattgctcataaaactctcgatttt
tcgtacatccacgatgatcctttaattaacaacatatcatctttatcggagtatgcttcg
tcaacaaaagacaccctgatgaaaaggttcaattatcattcagagcgggttctgctaact
actgccgaaaatgaagtaccaactgttgccgatttggaaggacaaatgaatgaagaaagc
acaaaaatagatccgaaatcaagggaagaggatgaaaatgaaataatgttagaaagtgag
gagttgagatcagataagcatgaggaggaattagaccttatttcattcgcagtgggtggt
gtagtcagaccagcaaagcattatactgatggacaagcacgagcttatcgggatattgtg
caaagggtatgcgaagctatgccagagaacgatgattatgatgacgatttagaggacgat
tcggatagtgattatgaagatctcttaagattagccactgctgtcacggaagcatcaggt
aagaacattacatcagagttgactgcaacagatttggttgacctacaagcaatccatgat
tctgttgccgagctattgaagcatttctggatgtgttttccgccgatgaatcctgatatg
gatgaaaaattaaaaaggatgaatataactttgcggaattttgaagaaactaaaattgct
tcagcagaggaacgatttgggaaaaaaaatcttgcacactgtcgacaaatgctcagtttc
gcttatgcgcgttatgacgcatatttgcagaaaaagaagaagtag

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