Loa loa (eye worm): LOAG_06008
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Entry
LOAG_06008 CDS
T02664
Name
(RefSeq) BSD domain-containing protein
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
loa
Loa loa (eye worm)
Pathway
loa03022
Basal transcription factors
loa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
loa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LOAG_06008
09124 Replication and repair
03420 Nucleotide excision repair
LOAG_06008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
loa03021
]
LOAG_06008
03400 DNA repair and recombination proteins [BR:
loa03400
]
LOAG_06008
Transcription machinery [BR:
loa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
LOAG_06008
DNA repair and recombination proteins [BR:
loa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
LOAG_06008
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
CREPT
Motif
Other DBs
NCBI-GeneID:
9943416
NCBI-ProteinID:
XP_020302690
UniProt:
A0A1I7VTS4
LinkDB
All DBs
AA seq
534 aa
AA seq
DB search
MSNKELLLRVEHVKYRMPGAAKSPIGTFYVYEDRIEWLDNASDEKLVVFFSDIRGQRISP
PNKTKTQLQICKHDEEQATFVFVNPLGKEMHVKDRDLVKEMLQQALIHHRQIVSQNATQS
LKYSKTKELEAKKKILERNKHLQELYKHLVASKLISAQDFWSEYYQNKDADGGKLGVSSG
FLSSIAQSEGTNGVKLNLNIDTIQSIFRTYPAVERKHLELVPHEMTEQEFWAKFFQSHYF
HREREVAPSPSDPFADCIKADNAEMRKLLDTKIAHKTLDFSYIHDDPLINNISSLSEYAS
STKDTLMKRFNYHSERVLLTTAENEVPTVADLEGQMNEESTKIDPKSREEDENEIMLESE
ELRSDKHEEELDLISFAVGGVVRPAKHYTDGQARAYRDIVQRVCEAMPENDDYDDDLEDD
SDSDYEDLLRLATAVTEASGKNITSELTATDLVDLQAIHDSVAELLKHFWMCFPPMNPDM
DEKLKRMNITLRNFEETKIASAEERFGKKNLAHCRQMLSFAYARYDAYLQKKKK
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacaaggaattattgttgcgtgttgaacacgtgaaatatcgtatgccaggtgct
gctaaatcgcctattggtaccttttatgtttacgaagatcggattgagtggctggataat
gcttcggacgagaagcttgtcgtcttttttagcgatattagaggacagcgaatttcgcca
ccaaacaaaacgaaaacacagctccaaatatgtaagcatgatgaagaacaagcaacattt
gttttcgttaacccacttgggaaggagatgcatgtaaaagaccgcgatttggtaaaagaa
atgttacaacaggcgcttatacatcatagacagatcgttagtcagaatgctacacagtcg
ctgaagtacagtaaaacgaaagagttagaggcaaagaagaagattttagaacgcaacaaa
catttgcaagaactatacaaacatttggttgcgtcgaaactgatatctgctcaagatttc
tggagcgaatattatcaaaataaggatgcagacggcgggaaactgggtgtttcaagtggg
ttcctaagcagcattgcgcaatccgaaggcacgaacggagtcaaattaaatctcaacatt
gatacaattcagagtatattcagaacctacccagcagtagaaaggaagcatctggaactt
gtgccacacgaaatgacagagcaagaattctgggccaagttttttcaatcacattacttt
catcgtgaacgtgaggtagcgcctagtccatccgatccatttgctgactgcattaaagct
gataatgcagaaatgcgtaaactattggatacgaagattgctcataaaactctcgatttt
tcgtacatccacgatgatcctttaattaacaacatatcatctttatcggagtatgcttcg
tcaacaaaagacaccctgatgaaaaggttcaattatcattcagagcgggttctgctaact
actgccgaaaatgaagtaccaactgttgccgatttggaaggacaaatgaatgaagaaagc
acaaaaatagatccgaaatcaagggaagaggatgaaaatgaaataatgttagaaagtgag
gagttgagatcagataagcatgaggaggaattagaccttatttcattcgcagtgggtggt
gtagtcagaccagcaaagcattatactgatggacaagcacgagcttatcgggatattgtg
caaagggtatgcgaagctatgccagagaacgatgattatgatgacgatttagaggacgat
tcggatagtgattatgaagatctcttaagattagccactgctgtcacggaagcatcaggt
aagaacattacatcagagttgactgcaacagatttggttgacctacaagcaatccatgat
tctgttgccgagctattgaagcatttctggatgtgttttccgccgatgaatcctgatatg
gatgaaaaattaaaaaggatgaatataactttgcggaattttgaagaaactaaaattgct
tcagcagaggaacgatttgggaaaaaaaatcttgcacactgtcgacaaatgctcagtttc
gcttatgcgcgttatgacgcatatttgcagaaaaagaagaagtag
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