Loa loa (eye worm): LOAG_06034
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Entry
LOAG_06034 CDS
T02664
Name
(RefSeq) hypothetical protein
KO
K12880
THO complex subunit 3
Organism
loa
Loa loa (eye worm)
Pathway
loa03013
Nucleocytoplasmic transport
loa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
loa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LOAG_06034
09122 Translation
03013 Nucleocytoplasmic transport
LOAG_06034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loa03019
]
LOAG_06034
03041 Spliceosome [BR:
loa03041
]
LOAG_06034
Messenger RNA biogenesis [BR:
loa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
LOAG_06034
Spliceosome [BR:
loa03041
]
Complex C
Other components
EJC/TREX
LOAG_06034
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
LOAG_06034
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_EML_2
WD40
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_Aladin
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_RFWD3
Beta-prop_TEP1_2nd
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_NOL10_N
Beta-prop_WDR75_1st
Tricorn_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_1st
DSE1_N
Beta-prop_NUP159_NUP214
Beta-prop_HPS5
Beta-prop_EIPR1
eIF2A
PAC11
CFAP251_N
NBCH_WD40
TRM82_WD
PD40
Beta-prop_Vps41
Beta-prop_TEP1_C
Beta-prop_IFT80_2nd
Beta-prop_At4g14310
Motif
Other DBs
NCBI-GeneID:
9943443
NCBI-ProteinID:
XP_003141618
UniProt:
A0A1S0U0I1
LinkDB
All DBs
AA seq
347 aa
AA seq
DB search
MGTQNREQSSTTLQRKNALLLSSSSSSSSKIQTFQDAISHFKKNDRVKTYDMQVPRPLTV
SWNCDGTRLAAGAEKSVSVITFDLSFRIKTIFRGFGHNEQVDQVAFHPSNPYLLASASTD
KSVRLWDIRQARTHTRLNTKAQNLNVAWSPCGTYLAYGDKEDSLSILDSRNLKTIKVESL
KDEVNEFAFDPSGKYLFVAMGSGQVNIFSTPDVTHRRTLQAHPAQAACVCLAVSPDGRRF
AVGASDAVCSIWDANELICESNMGRLDYPLRSISFSADSQLIACASEDHFIDICWAENGA
RVHELRVNAETFTCAWHPSMYLLAYASAPSLDSRDREVTVNIFGFTM
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgggtacacaaaatcgggaacaatcctcaacaacattacagcggaaaaatgcattatta
ttatcatcatcatcatcatcatcatcaaaaattcagacatttcaagatgctatttcacat
ttcaagaaaaatgatcgggttaaaacatatgacatgcaggtgccgcgacctcttactgta
tcctggaactgtgatggtactcgtcttgctgcaggagcggaaaaaagtgtatcagtgata
acatttgatttatcatttcgaatcaaaacaattttccgcggctttggtcacaatgaacaa
gttgatcaggttgcttttcatccatcaaatccatacttgctagcttcagccagcacagat
aaatctgttcgactgtgggatattcgacaagcacggacacatactagattaaatactaag
gcgcagaatttgaatgtagcctggtcaccatgtggtacatatttggcatatggagacaag
gaagattccttaagtattcttgatagtcgaaatttgaaaacaatcaaagttgaatcattg
aaagatgaagtgaatgaatttgcgtttgatccgtctggaaaatatttatttgtggctatg
ggaagcggacaagtaaatattttctcgacaccagatgtgacacatcggcgaacgttgcaa
gcacatcctgctcaagctgcttgcgtttgtttggccgtttcaccggacggtcgacgtttt
gccgtcggtgcatcagatgctgtctgttcgatttgggatgctaatgagctgatctgtgaa
tcaaatatggggagattggattatcccttacgatcaatctcgttcagcgcggatagtcaa
cttatagcctgtgcaagtgaagaccatttcattgatatttgttgggcggagaatggtgca
agagtacacgaacttcgagtaaatgctgaaacatttacatgtgcttggcatccgagtatg
tatctacttgcgtatgcctcagctccatccctagacagtcgtgatcgagaagttacagtc
aatatttttggatttactatgtga
DBGET
integrated database retrieval system