KEGG   Loa loa (eye worm): LOAG_06034
Entry
LOAG_06034        CDS       T02664                                 
Name
(RefSeq) hypothetical protein
  KO
K12880  THO complex subunit 3
Organism
loa  Loa loa (eye worm)
Pathway
loa03013  Nucleocytoplasmic transport
loa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:loa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    LOAG_06034
  09122 Translation
   03013 Nucleocytoplasmic transport
    LOAG_06034
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:loa03019]
    LOAG_06034
   03041 Spliceosome [BR:loa03041]
    LOAG_06034
Messenger RNA biogenesis [BR:loa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     LOAG_06034
Spliceosome [BR:loa03041]
 Complex C
  Other components
   EJC/TREX
    LOAG_06034
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    LOAG_06034
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_EML_2 WD40 Beta-prop_WDR5 WD40_CDC20-Fz Beta-prop_WDR3_1st WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd WDR55 WD40_Gbeta Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_WDR3_2nd Beta-prop_Aladin Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_RFWD3 Beta-prop_TEP1_2nd WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd Beta-prop_NOL10_N Beta-prop_WDR75_1st Tricorn_2nd Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_1st DSE1_N Beta-prop_NUP159_NUP214 Beta-prop_HPS5 Beta-prop_EIPR1 eIF2A PAC11 CFAP251_N NBCH_WD40 TRM82_WD PD40 Beta-prop_Vps41 Beta-prop_TEP1_C Beta-prop_IFT80_2nd Beta-prop_At4g14310
Other DBs
NCBI-GeneID: 9943443
NCBI-ProteinID: XP_003141618
UniProt: A0A1S0U0I1
LinkDB
AA seq 347 aa
MGTQNREQSSTTLQRKNALLLSSSSSSSSKIQTFQDAISHFKKNDRVKTYDMQVPRPLTV
SWNCDGTRLAAGAEKSVSVITFDLSFRIKTIFRGFGHNEQVDQVAFHPSNPYLLASASTD
KSVRLWDIRQARTHTRLNTKAQNLNVAWSPCGTYLAYGDKEDSLSILDSRNLKTIKVESL
KDEVNEFAFDPSGKYLFVAMGSGQVNIFSTPDVTHRRTLQAHPAQAACVCLAVSPDGRRF
AVGASDAVCSIWDANELICESNMGRLDYPLRSISFSADSQLIACASEDHFIDICWAENGA
RVHELRVNAETFTCAWHPSMYLLAYASAPSLDSRDREVTVNIFGFTM
NT seq 1044 nt   +upstreamnt  +downstreamnt
atgggtacacaaaatcgggaacaatcctcaacaacattacagcggaaaaatgcattatta
ttatcatcatcatcatcatcatcatcaaaaattcagacatttcaagatgctatttcacat
ttcaagaaaaatgatcgggttaaaacatatgacatgcaggtgccgcgacctcttactgta
tcctggaactgtgatggtactcgtcttgctgcaggagcggaaaaaagtgtatcagtgata
acatttgatttatcatttcgaatcaaaacaattttccgcggctttggtcacaatgaacaa
gttgatcaggttgcttttcatccatcaaatccatacttgctagcttcagccagcacagat
aaatctgttcgactgtgggatattcgacaagcacggacacatactagattaaatactaag
gcgcagaatttgaatgtagcctggtcaccatgtggtacatatttggcatatggagacaag
gaagattccttaagtattcttgatagtcgaaatttgaaaacaatcaaagttgaatcattg
aaagatgaagtgaatgaatttgcgtttgatccgtctggaaaatatttatttgtggctatg
ggaagcggacaagtaaatattttctcgacaccagatgtgacacatcggcgaacgttgcaa
gcacatcctgctcaagctgcttgcgtttgtttggccgtttcaccggacggtcgacgtttt
gccgtcggtgcatcagatgctgtctgttcgatttgggatgctaatgagctgatctgtgaa
tcaaatatggggagattggattatcccttacgatcaatctcgttcagcgcggatagtcaa
cttatagcctgtgcaagtgaagaccatttcattgatatttgttgggcggagaatggtgca
agagtacacgaacttcgagtaaatgctgaaacatttacatgtgcttggcatccgagtatg
tatctacttgcgtatgcctcagctccatccctagacagtcgtgatcgagaagttacagtc
aatatttttggatttactatgtga

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