Loa loa (eye worm): LOAG_06367
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Entry
LOAG_06367 CDS
T02664
Name
(RefSeq) hypothetical protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
loa
Loa loa (eye worm)
Pathway
loa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
loa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
LOAG_06367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
loa03021
]
LOAG_06367
03019 Messenger RNA biogenesis [BR:
loa03019
]
LOAG_06367
Transcription machinery [BR:
loa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
LOAG_06367
Messenger RNA biogenesis [BR:
loa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
LOAG_06367
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
Pcf11_C
zf_PCFS4
zf_UBZ
Pfc11_Clp1_ID
DUF1236
Astro_capsid_N
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
9943784
NCBI-ProteinID:
XP_003141951
UniProt:
A0A1I7VTJ8
LinkDB
All DBs
AA seq
856 aa
AA seq
DB search
MAKNAEEAALEYRQALDDLKDNNKMQINLMTILADDYNSFSKEIVAVIAQQIMKVIPPQK
LAVMYVMDSILKNVTGAGNYKEHIEKIVYKAFLHVFETGDERTRLALHKLRQTWTGIFQR
STLYKIDLAVNAIDPAWPIVTPQPVNTPVSGHRPEPVVITPHQPRAAKVHVNPHFLQKNS
VTATSATATATTTATTTTTTATSATIGNKLQMNCEKKKIGLDPRLMKHSDGAAAGRPVSL
IAAKPANVIVKQEPIDSSDVDERLNAQQTGNLLDSTGPRSFGHRKEQELGGRSPNDIKRK
SSPCVSDLETVEKKPRIRTPPLDRDRRTNSPSTSSSIIRPTNDLGSHAFITTARRAQAAS
SANMITAPPTPVIVPVSGPVILPAIPSTSGPLPFLPPIMPTVPLPMPLPNMTSILAGPPV
VPSSTNTQDLTRTDSNHVPPIINNETPKLEGIPANNRIFVDGRAYEVSYINDVPVIERNG
LPHRIYFTGVPRNVIIDGAAYQLAFGEEKRVIIDGEEHVLRFGAPSRELYMGTYPFKGAF
GGPPIFATINGIRHEIRLGGPPPEVKIEPDPCYELLRYMPRTGIDTSNKTTVPTGSEPQG
TVDVKGLLAKLQRTGILSALNANNRRDGAGEDSPNRSVTPPIPSEHRGEVTERLPKPPTD
LKSFSMRALRIRYTSVVESLHQKRRLCPNCGLRFSELKGERYQQHLDWHFRENLKSNESS
RCRDWYLPIDEWYEFSEQEELTASTSAARLAGGGSNDATKDTNRGTYNVPSDTVPSKECG
VCKEKFEEYWDEDDDVWKLRDCMLGQDGRIFHPGCILDASTVRISEEDSPSEEEQNDKLS
FLKSLKLKKDFSSLDT
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaatgctgaagaggctgctctggaatacaggcaagcactggatgatttaaaa
gacaacaacaaaatgcagattaatttgatgactattcttgccgatgattacaattcattt
tccaaggaaattgttgcagttattgctcaacagattatgaaagttataccacctcaaaaa
ttagctgtaatgtatgttatggattcgatattgaaaaatgtaactggcgctggtaattac
aaagaacatattgaaaagattgtttataaagcttttctgcatgtttttgaaacgggtgat
gaaagaacacgtttggcactgcataaactcaggcaaacgtggacgggaatatttcagcgt
tcaactttatacaaaatagatttggctgtaaacgcaattgatccagcttggccgattgtt
actcctcaaccagttaacactccggtatctggacataggccagaacctgttgtaataaca
ccacaccaacctcgagcagcgaaagttcatgtcaatcctcattttttgcagaaaaattct
gttacagctacgtctgctactgctactgctactaccactgctactactactactactact
gctaccagtgctactattggcaacaaattgcaaatgaactgtgagaagaaaaagataggt
ttggatccgagattgatgaaacattcggatggagcggcagctggcagaccagtatcgttg
attgcagcgaagccggcaaatgtcatcgtaaagcaggaaccaatcgacagcagtgatgta
gatgaaagattaaatgcacagcagactgggaacttgttggatagtaccggtcctcggagt
tttgggcacagaaaagaacaagaactgggcggacgttcaccgaacgacataaaacgtaaa
tcttcgccatgtgtatcagatctggaaactgtggagaagaaacctcgaatacgtacacca
cctctagacagagatcgtcgtacgaattcaccttctacatcttcctccataatacgtcca
acaaacgacctcggttctcatgctttcattacaactgcacgacgcgcacaagcagcttct
agtgcaaacatgataacggcaccacccactccagttatagtgccagtttctggaccagta
attttgcctgcgatcccatctacctcgggtccgctaccatttttaccgcctataatgcca
acagtacctttaccaatgccacttcccaatatgacttcgattttagcaggtcctcctgta
gtaccctcttccacaaatacgcaagatttaacacgaaccgactcaaaccatgtaccacca
atcatcaataacgaaactccgaagttggaaggtattccagcaaataacagaatatttgtg
gatggtcgggcctacgaagtgtcatacattaatgatgtcccagttatcgaaaggaatggt
ctgccgcataggatctattttacgggtgtgccacgcaatgtaatcatagatggtgccgct
taccaactggcatttggtgaagaaaaaagggtgataattgatggcgaggagcacgtttta
aggtttggagcaccatcgcgtgaactgtatatgggaacatatccattcaaaggtgcattt
ggtggtccaccaatctttgctacgattaatggaatacgccatgaaatacgattgggtgga
cctcctccagaagttaagattgagcctgatccatgttatgagctactgcgatatatgcct
cgtacaggaattgatacgtcgaataaaactacagtccccactggaagtgaaccgcaggga
acagtcgatgttaagggtttgcttgctaaactgcagcgtacgggaatactttctgctttg
aatgcgaataatagaagagatggagcaggagaggactcacccaatcgatctgtaacacca
cctattccttctgaacatcgtggtgaggtaaccgaaagattgccaaaaccaccaactgac
cttaaatctttctcgatgcgtgctcttagaatacggtatacgtctgttgtggaaagcctt
catcagaaaagacgtctttgtcccaactgcggtttgcgctttagtgagctgaaaggtgaa
aggtaccaacaacatcttgactggcattttcgtgaaaatctaaaatcaaatgaaagttcg
cgttgccgtgattggtacttaccaattgatgaatggtatgaatttagtgaacaagaagaa
ttaacagcatcgacatcagcagctcgtcttgctggtggtgggtctaatgatgcaacaaag
gatacaaacagaggaacatataacgtaccgtctgacacagtcccatcgaaggaatgtggt
gtatgtaaagagaaattcgaagaatattgggatgaagatgatgatgtatggaaacttcgg
gactgtatgcttggccaggatggcagaatatttcacccaggttgcatactagatgcatca
accgtccgaatatcagaagaggatagcccgagtgaagaagaacaaaatgataagttgtca
ttcctgaaatctttgaaattaaagaaagatttttcttctctggatacttga
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integrated database retrieval system
