Loa loa (eye worm): LOAG_07303
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Entry
LOAG_07303 CDS
T02664
Name
(RefSeq) hypothetical protein
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
loa
Loa loa (eye worm)
Pathway
loa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
loa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LOAG_07303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
loa03021
]
LOAG_07303
Transcription machinery [BR:
loa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
LOAG_07303
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
SCO1-SenC
AhpC-TSA
DUF6800
Motif
Other DBs
NCBI-GeneID:
9944720
NCBI-ProteinID:
XP_003142884
UniProt:
A0A1I7W2G2
LinkDB
All DBs
AA seq
797 aa
AA seq
DB search
MFRVTCAVLSRLSPSNSSRQCYCIRRCFLHATNSLRFAAIDNDDINDKKKQVRNDDLKVD
IKDLEEALKKDEMPADPMETIRKLKEQKKGIREIFTGKLAMIIVGVSVILVIILSGLREK
KMRELESERKKTIGKARIGGTWELVGMDGELGGSEQLKGNWLLLYFGFTHCPDVCPDSIE
KMVEVVEILEKSEEKIKVIPVFISVDPERDTIERVKEYCAEFSPKIKGYTGSKEQVAKVA
KAFRVYYSQGPKIDGKDYIVDHTVIMYLMDPDGNFHDYYGQNRSAQEIAKVIKLKVFKRD
MLMASPATPKHYVVRIPKRNGSRRYSILKFNGTLKIDPGKWATADYSIRMAREDNKEQVA
ANEIRQDYGEGSEYGKALREEARRKKYGRQLQTYQHDNQPWMLSITDSSAKERKFRSIRE
GGAGEHADYWVFLKSGEEFHAYKVDEWYQFMPFSTHRTLDIDQAEERFRERNRVMNQFAL
KAQIQQQLKAMDEDGEQMIKTTKSLKIKDEASSDENSDGEKGDDEDDAPTGSLKPKKSLK
PAIRARKDKRQRVENADEVAAYESDDGDDEGREYDYMSDSGSESDRDAVPMEQKVDEAMV
AVGDETGLKKLIGDDFSDTDSSDLDDTTKKLLSTVEDDDGDEIKKQFIDVDERDSSGSDS
DDPDKEITSAIFLPVKKTPEEPLLSTRKRPLENAALADTEAKKIKTEQQLTTPSVPSTQP
AANQDGLNEETVRRYLRRKPHTTKELLSKIKSKCGDMEKSEIVQKLAAILKRIEPHQFKQ
KHGKKEVLFFSLNNNLA
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtgtaacttgtgctgttctctctcgattgtcaccttccaattcgtctcgtcag
tgttactgtatcagaagatgtttccttcatgctactaattcactacgctttgctgctatt
gacaatgatgatatcaacgacaaaaaaaaacaagtacgaaatgatgatttgaaagtggac
ataaaggatttggaagaggctttgaaaaaggatgaaatgccggcagatcccatggaaacc
attcggaagttaaaggagcagaagaaaggaattcgcgagattttcacaggaaaactggca
atgattattgttggtgtcagtgttattctagttatcattttgtcaggtttgcgagaaaag
aaaatgagagaactggaaagtgaaaggaaaaaaacaatcggtaaggctcggattggtggt
acttgggaattggtcggcatggatggtgaattaggaggatctgaacagcttaaaggaaat
tggcttttgttatattttggttttacacactgccctgatgtctgccctgattctattgaa
aaaatggttgaagttgtggaaattcttgaaaaaagcgaggaaaaaatcaaagtaattcca
gttttcatatcggtagatccggaacgtgatacaattgaaagagtgaaagaatactgcgct
gaattctcccccaaaataaaaggctacactggttcaaaggaacaggttgccaaagtagca
aaggcatttcgcgtctactacagtcaaggacctaaaatagacgggaaggattacattgtt
gatcacactgttatcatgtacctgatggatccagatggcaattttcatgattattatggt
cagaatcgttctgcacaggagatagcaaaggttatcaaattgaaggttttcaagcgtgat
atgctgatggcctcacctgcaacaccgaaacattatgttgtgcgtattcccaaacgcaat
ggatctcgacgttattcaattttgaaattcaatggtacgttgaaaattgatccaggcaaa
tgggcaacggccgattacagtatacgaatggcacgtgaagataataaagaacaagtagct
gcaaatgaaatccgacaggactatggcgagggttccgaatatggtaaagcattgcgagaa
gaagcacggcgcaagaaatacggccgccagcttcaaacctatcagcatgacaatcaacca
tggatgctaagcattacagactcaagtgctaaagaacggaagtttcgtagcattcgtgaa
ggtggagcaggagaacatgcagattattgggtatttttaaaatcaggggaagaatttcat
gcttacaaagttgacgaatggtatcaatttatgccgttttcgactcatcggactcttgac
attgatcaggcagaagaacggtttcgtgagcgaaaccgtgtcatgaatcagtttgcctta
aaagctcagatacagcaacagctgaaagctatggatgaagatggtgaacagatgataaaa
acaacgaaatcacttaaaatcaaggatgaagctagttcggatgagaattctgatggcgaa
aaaggtgacgacgaagatgatgctcctaccggaagtttgaaaccgaaaaagagtttaaaa
cctgctattcgagcccggaaagacaaaaggcagcgggtagagaatgcggatgaggtagca
gcttatgaaagtgatgatggtgatgatgagggtcgagagtatgactacatgagtgatagt
ggctcagaaagcgatcgagatgcagttcctatggaacagaaagtggatgaagcgatggtt
gccgtaggtgatgaaacaggtctgaaaaaattgatcggtgatgacttttctgataccgac
agcagtgatttggacgataccacaaagaaacttctttctactgtggaagatgatgatggt
gatgaaataaaaaaacagtttattgatgtcgatgaaagggattcatcaggcagcgattcc
gatgatcctgataaggaaattacctccgcaattttcttacccgtgaaaaaaactccagag
gaaccgttattgtcaacaagaaaaagaccattagaaaatgcagctttggcagacactgag
gctaagaagattaaaaccgagcaacagcttactacaccatcagtaccatctacacaacca
gcagcaaatcaggatggtctaaacgaagaaacagtgcgacggtatctacgaaggaaacct
catacaacgaaagaactgctttctaaaattaagtcaaaatgtggtgatatggaaaaatcg
gaaatagtgcaaaagttggctgctatattgaagcgaatagaaccccatcaattcaaacag
aagcatggcaagaaggaagtactgtttttctcattgaacaataatcttgcctaa
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