Loa loa (eye worm): LOAG_08467
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Entry
LOAG_08467 CDS
T02664
Name
(RefSeq) SH2 domain-containing protein
KO
K11292
transcription elongation factor SPT6
Organism
loa
Loa loa (eye worm)
Brite
KEGG Orthology (KO) [BR:
loa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
loa03021
]
LOAG_08467
03036 Chromosome and associated proteins [BR:
loa03036
]
LOAG_08467
Transcription machinery [BR:
loa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
LOAG_08467
Chromosome and associated proteins [BR:
loa03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
LOAG_08467
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
Tex_central_region
HHH_9
Tex_YqgF
SH2
S1
Spt6_S1
HHH_3
SPT6_acidic
Tex_N
S1_RRP5
Motif
Other DBs
NCBI-GeneID:
9945895
NCBI-ProteinID:
XP_020302088
LinkDB
All DBs
AA seq
1432 aa
AA seq
DB search
MAGFVVDEDEAEEDGDDNEDDDRSDIEKDDDLELDDEDLDLLNDNLDIQQRPAGGRVVIE
SDEEEDRDRSKSNLYDKDDLAGDDDQRSDYRESERRVYDGDEGSGTESEHSEDDFIVTDD
GQQPQHRQRRYRFADVPEQAIDDAREIFGVDDFNFAEFYDEDAEPGEDEDEYPEDEEQEE
LEGGDVSRSRKMKPKEKRATLMDTIEPAELEEKLLSPMDKRIQLDDRPERFQLRRVPVCE
ADEHELEIEAKWIYQYAFDNATLSEQEESCLTVLSNLDLRIDERAKIAAEAPDKIKEALK
FIRNQLFEVPFIAFYRKEYVESCLVINDLWKVYQWDEKWCHLQQRKKRLLELMKRMLNYQ
MENDNAAGMRIVTEQDMNEVHGVQTVEGLMDVSTKFQLYYGPEVPKMIDWEKIQNLSEDD
PEREAAEMRFRAATRTDKYMLCVQNGLSGMASRFGLTPLQFAENLDWKRHDIVQDDEEPL
KAAEQYVCQSFPTPEAVLTGAIHVVAKQLSREPKVRELLRLRYRLRLKISVCPTKKGREE
IDENHKLWPRRYIRDKPVASLRHDEYLWYVQAHAGGLLNLKLHCDTEDDVRFEKTMLQEF
LSEQPYHRDEYSRVVDTWNKIREEAVTVCVNNFLLPVFEREAHERLLQEAKDYVIKQSTQ
NLYDRIKTAAYRNVHDDDDDDFESGFASGTRVLSIAYPEERDQASFCALLDQDGQVLDHL
RLIHITKSMNSKRPGEADLKRQDMVHLRKFIEKRRPCVIAICGENMDAYYLRRDIESLLH
EISGMAKEIPVEIVDNEAAKIYMHSKQAIAEFPNYPLMLRQAVSLGRLLLDPLIEYAHLC
NTDDDILCVSYHPLQSEVNKEELLFALSLEFINRVNEVGVDVNRCLEYSHTSYLLQFVCG
LGTRKAVHLLKILKQNDNLLESRTKLVTLCRMGPKVFMNSAGFIKIDTAKVSERTDAYVE
VLDGSRVHPETYEWARKMAVDALEIDDAADPTSALEEILQNPDKLKDLDLDAFAEELARQ
GFGNKSITLYDIRAELNHRYKDLRIPYESPSAEKIFTMLTKETSDSIGKLVMGRVMHIVY
RKPRDPEERERVPPIRDERTGQWKCQYCYKPDFNNTNEVWQHIDSCPGQPVGVKVRFDSG
ITGFIPNKYLSDRPDSFVDPSERVRRNQPIYCRILELDPDKFSATCSCRSSDLRGLQPQN
SEFDRYFDKLKYQDDDEKDKKLREKRKIVTYFVKRVISHPSFHNVTFKDAERMLQKFEQG
EAIIRPSSKSVSHLTVTWKVADGIYQHIDIKEEGKQHQFSLGKTLLIGTEEFEDLDEILA
RHIQPMAALARDVLSHKYFLDGKRAEDRDAIESYLFDEKKRNPQRIPYTLTPSQEYPGKF
VVSYLPRNKARHEYMTVTPEGFRFRQQLFQSLEVVLSWFKVHYREPPPGMYR
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtttcgttgtcgatgaagacgaagctgaagaagatggtgatgataatgaggac
gacgacagaagtgatattgaaaaagatgatgatctagaattggacgatgaagacttggac
ttgttgaatgataacttagacatacagcagcgtccagctggtggtcgtgtggtaattgaa
agtgacgaagaagaggatcgtgaccgtagcaagagtaatctttatgataaggatgatttg
gctggtgatgatgatcagcgcagcgattacagggaatcagaacgacgtgtttatgatggc
gatgagggttcaggcacggaaagcgaacattctgaagacgacttcattgttacggatgat
gggcaacagccgcaacatcgacagcgtcgttatcgttttgcagatgtgccagagcaagct
attgatgacgcgcgggagatattcggagtcgatgactttaattttgctgaattttacgac
gaagatgctgaaccaggcgaagatgaggatgaatacccggaagatgaagaacaagaagaa
ctggaaggaggcgatgtatcgcgttcccgtaagatgaaaccgaaagaaaagagagctact
ttgatggatacaattgaacctgcagagcttgaagagaaactactttctcctatggataaa
cgtatacaactggatgatcgtcctgaacgcttccaacttcgtcgggttccagtgtgtgag
gctgatgaacacgagcttgaaattgaagccaaatggatttaccagtatgcatttgataat
gctactttgtcggaacaggaagaaagctgtcttacggtattgtcaaatttggatcttcgc
attgatgaacgagctaaaattgctgcagaggcaccagataaaattaaggaagccttgaaa
ttcatcagaaatcaattgtttgaggtaccattcatagcattttatcgtaaggaatatgta
gaatcatgcttagtaatcaacgatttatggaaagtttatcagtgggatgaaaagtggtgt
cacctgcaacaaagaaagaaacgtttattagaattgatgaaacggatgttgaattatcag
atggagaatgacaacgcggcagggatgcgtattgttactgagcaggatatgaatgaagtg
catggagtacaaacagtagaaggtttgatggatgtttcgacgaaattccaattgtattat
ggtccggaagtaccgaaaatgatagactgggaaaaaattcaaaatttgagtgaagacgat
cctgaacgtgaagctgctgaaatgcgttttcgtgctgctacaagaaccgacaaatatatg
ctatgtgtccagaatggattatccggaatggcttcacgttttggcttgactcctctgcaa
tttgcagaaaatcttgattggaagcggcatgatattgtgcaagacgatgaagaaccactg
aaggcggcagagcaatatgtctgtcaaagtttccccactccagaagctgtgttaactggt
gctattcatgttgttgctaaacagctaagcagagaaccaaaagtacgagaactgctgcgg
ttacgatacaggttacgtttgaagatttcggtatgtccgacgaaaaagggccgagaagaa
atcgatgaaaaccacaaattgtggcccagaaggtacatacgcgataagcctgttgcaagt
ttacgacatgatgaatatttgtggtacgtgcaggcgcatgctggtggattactgaattta
aagttgcactgtgacacagaggacgatgttagatttgaaaagacgatgcttcaagaattt
ctttcagaacagccttatcacagagatgaatattctcgcgttgttgatacatggaacaag
atcagagaagaagcagtaacagtttgtgttaacaactttcttttgccggtgtttgaacgc
gaagctcatgaaaggcttctgcaggaagcaaaagattatgtgataaaacaaagcacgcag
aatttgtatgatcgaattaaaactgctgcttatcgtaacgtgcatgatgatgatgatgat
gactttgaaagtggatttgctagtggaacaagagttttaagtattgcgtatcctgaagaa
agagaccaggcatcattttgtgctcttcttgatcaagatggccaagttttagaccatctt
cgactaattcatattacgaaaagtatgaattcaaaaagaccaggtgaagcagacctaaag
cgtcaggatatggttcatttgcgcaaattcatcgaaaaacgtcgcccttgtgtaattgca
atatgcggtgaaaatatggatgcttattatcttcggcgggatattgaatctttactacac
gaaatttctgggatggcaaaagaaattccagtggaaattgtagataatgaagcagccaaa
atttatatgcacagcaaacaggcaattgcggaattccctaattatccactaatgctgcga
caagcagtttccttaggccgtttgttgttggatccattaatcgaatatgcacacttatgt
aatacggacgatgacattctttgtgtttcatatcatccgttgcaaagtgaagttaacaag
gaagaactattgtttgcgttatcactggaattcataaacagagtgaatgaagtaggtgtg
gacgtaaatcgttgtttggaatactctcatacctcatatttgttgcaatttgtttgtggc
ttagggacgagaaaggcggtgcatttactgaaaatactgaaacagaatgataatcttctg
gaaagtcggacaaaattagttacattgtgtcgtatgggaccgaaggtatttatgaattcg
gcaggctttatcaagattgacacagcaaaggtgtctgaaagaactgatgcttatgttgag
gtgctggatggttcccgagtgcatccagaaacatatgaatgggctcggaaaatggcggtc
gatgctctagaaattgatgacgctgctgatcctacaagtgctctggaagaaattttgcaa
aatccagataagcttaaggatcttgatcttgacgcttttgcggaagaacttgcccggcaa
ggttttggtaacaaaagtatcacactgtatgatattcgagcagagctaaatcatcgatac
aaagatcttcgcattccttacgaaagtccatcggctgaaaaaattttcacgatgttgaca
aaggaaacttctgattccatagggaaactggtaatgggacgagtaatgcatatagtttat
cgcaaaccgagagatccagaggaacgagaacgtgtacctcctattagagatgagcgtacg
ggtcagtggaaatgccagtattgttacaagcctgatttcaacaatacaaatgaggtgtgg
caacacattgactcttgtcctggtcaaccagtgggtgtaaaagtacgattcgacagtggt
ataactggtttcattccaaataagtatttatcagatcgacccgattcgtttgtggatcca
agcgagagggttaggcgcaaccaacccatatattgtcgaatactggagttggatcccgat
aaattttcggcgacctgttcatgtcgatcatctgaccttagaggcctacagccacagaat
agcgagttcgaccgttacttcgacaaactgaagtatcaggatgacgatgaaaaggataag
aaactaagggagaaaaggaaaattgtaacatatttcgtgaaaagggttatatcgcatcca
tcatttcataatgtgacttttaaagatgccgaacgaatgcttcaaaaatttgaacaaggc
gaagccatcattcgacctagttcaaaatccgtttcacatctaactgtaacatggaaagtt
gctgatggtatttaccaacacatcgatattaaagaagaagggaaacagcaccaatttagt
cttggcaaaacgttgttaattggtacagaagagttcgaagatttggatgaaatccttgct
cgccacatacaacctatggcagcgttggcccgtgatgttttgtcgcataaatattttttg
gatggcaaacgggctgaagatcgagatgctattgagagttatctcttcgatgaaaaaaaa
cgaaatccccagcggataccttatacgttgacaccatcacaagaatatcccggaaaattt
gttgtatcgtatttgccgcgcaacaaagcaaggcatgagtatatgaccgtaacaccagaa
ggatttcgttttcgacagcagttgtttcaaagtcttgaagttgttttatcttggttcaaa
gtgcattatcgagaaccaccaccaggaatgtatcgttga
DBGET
integrated database retrieval system
