Loa loa (eye worm): LOAG_09017
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Entry
LOAG_09017 CDS
T02664
Name
(RefSeq) hypothetical protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
loa
Loa loa (eye worm)
Brite
KEGG Orthology (KO) [BR:
loa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loa03019
]
LOAG_09017
03041 Spliceosome [BR:
loa03041
]
LOAG_09017
03036 Chromosome and associated proteins [BR:
loa03036
]
LOAG_09017
Enzymes [BR:
loa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LOAG_09017
Messenger RNA biogenesis [BR:
loa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
LOAG_09017
mRNA cycle factors
Common to processing body (P body) and stress granule
LOAG_09017
Spliceosome [BR:
loa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
LOAG_09017
Chromosome and associated proteins [BR:
loa03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
LOAG_09017
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
ResIII
Motif
Other DBs
NCBI-GeneID:
9946448
NCBI-ProteinID:
XP_020301967
UniProt:
A0A1S0TSQ2
LinkDB
All DBs
AA seq
754 aa
AA seq
DB search
MNSGNFGYGSQNFDSGYQYVKGAPGSEGWTGGEAPGTQLPLPPNATTPAPRSNDTLPQHE
SRYVPPHMRHAAAAAPETIPEGAPVYENWSRGPQQYVRSGRGSSGTFSDRNVPMRKSQSY
AGMQPQNDYMTQWNSNTPVQGYDYQPCMGGRPGRGRAGFGQPVSGFNRSDGHARGRGTYG
DGHGSTRGGRPNYSGRYSYDRRAVHDEQQWGSQHQSGFRRQDDAVPDNSRWAGLRDPLPE
RQLQWTEQLPRDELLESELFAGMNSGINFDKYEEIPVEATGQDCPSPIALFADLKLHPWI
EENIRLSGYGRPTPVQKYSIPTLMNNRDLMSCAQTGSGKTAAFLVPLINNVLQAGPDALY
KSTTQQNGRRRQYPAALILSPTRELSLQIYNESRKFAYRTPITSALLYGGRENYREQINK
LRLGVHILIATPGRLIDVMEQGLIGLDGCRFLVLDEADRMLDMGFEPQIRQIVDLSKMPP
KGQRVTAMFSATFPKEIQVLAQDFLMPNYVFLAVGRVGSTSENIMQKIVWVEEHEKKSFL
MDLLDAGEPSALTLVFVETKRGASDLAYYLQKDGYNVVAIHGDLKQFDREKHLETFRSGV
APILVATAVAARGLDIPNVKHVINYDLPSDIDEYVHRIGRTGRVGNVGLATSFFNDKNRN
IARDLAELVVEANQELPEWLEKISADAQRYGTRPGRTKGGSRFGGRDHRVQYTGSSGGSG
SHRQNGINYSPGSNQWNQPQRSARAPPQQDWWNN
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtggcaattttggatatggtagccagaatttcgatagtggctaccaatatgta
aaaggcgctccaggttccgaaggctggactgggggggaagcgcctggaacgcaactcccc
ctcccgcctaacgctactacgccagctccacgatcaaatgacactctaccccaacatgaa
agccgttatgtacctccacatatgcgccatgctgcagcagcagcaccagaaacgattccg
gaaggtgcaccggtatatgaaaattggtcgcgtggaccgcagcagtatgtacgtagtgga
cgtggaagtagtggtacgtttagtgaccgcaatgtaccaatgcggaaaagtcaaagttac
gccggcatgcaaccgcaaaatgattacatgacacagtggaatagtaatacacctgtgcaa
ggctatgattatcaaccatgcatgggtggtagaccaggacgtggacgagctggttttgga
caacccgtaagtggtttcaatcgaagtgatggacatgcacgtgggcgaggtacctacgga
gatggtcacggaagtactcgtggtggtcgtccaaactattccggacgttattcttatgat
cgaagagcggtacatgatgagcaacagtggggatcgcagcatcagagtggttttcgacgc
caagacgatgcagtacctgataattcccgctgggcgggattgcgagatccactgccggag
cgtcagcttcagtggacggagcaattaccacgtgatgaacttttggaatcagaactgttt
gctggaatgaattctggtattaattttgataaatacgaagagattcctgttgaagcaacc
ggtcaagactgtccttcgccgatagcgctatttgctgacctgaagcttcatccatggatc
gaagagaatattcgactttcgggttatggccgtcccacacccgttcagaaatactctatt
ccaacacttatgaataatcgcgacctaatgtcatgtgctcaaactggctccggcaaaaca
gctgcatttttggtgccactgatcaacaacgtcttacaagctggtccagatgctctttat
aagtcaaccacccagcaaaacggacgtcgacgtcaatacccggctgcgttgatcttatcg
ccaacacgtgagctttcgttgcaaatttacaatgaatcgcgtaaatttgcatatcgtact
ccaattacttcggctctcctgtatggcggtcgtgaaaattaccgtgaacaaatcaataaa
ttgcgtttgggagtgcatattctgattgcgacacctggccgtctgattgatgtaatggaa
caaggtctcattggtcttgatggttgccgtttcttagttctagacgaagcagatcgaatg
cttgatatgggctttgaaccgcaaatacgacaaattgttgatttatcaaaaatgcctccg
aaaggccaacgagtgactgcaatgttttcggcaacatttccgaaagaaattcaagttctt
gcacaagactttttgatgccaaattatgtgtttctagctgttggtcgcgttggttcaaca
tcggagaatataatgcagaaaattgtttgggtagaagagcatgaaaaaaaaagcttttta
atggatctgcttgatgctggagagccatctgcattaacactcgttttcgtggaaaccaaa
cgtggagcaagcgatttggcatattacttacaaaaagatggctataatgtcgttgcaatt
catggtgatctaaaacaatttgatcgtgagaagcatctcgaaactttccgttccggtgtt
gctccaatacttgttgctacagctgtcgctgctcgtggtctggatataccaaacgtgaaa
cacgtcatcaattatgatttgccttccgatattgatgaatatgtgcatcgcattggtcgt
actggacgtgtcggtaatgttggacttgctacatcattttttaatgataagaatcggaat
atcgctcgcgatttggcagaactagttgttgaagcaaaccaggagcttcctgaatggctg
gaaaaaatatctgcagatgcacaacgctatggaacacgaccaggtcgtacgaagggaggc
agtcgctttggtggtcgcgatcaccgtgttcaatataccggaagtagtggaggtagtgga
tcacatcgtcaaaatggaattaattattcgccaggcagtaatcagtggaatcaaccgcaa
cgctctgctcgtgctcctccacaacaggattggtggaataattga
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integrated database retrieval system
