Loa loa (eye worm): LOAG_16507
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Entry
LOAG_16507 CDS
T02664
Name
(RefSeq) hypothetical protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
loa
Loa loa (eye worm)
Pathway
loa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
loa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
LOAG_16507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
loa03021
]
LOAG_16507
03019 Messenger RNA biogenesis [BR:
loa03019
]
LOAG_16507
Transcription machinery [BR:
loa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
LOAG_16507
Messenger RNA biogenesis [BR:
loa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
LOAG_16507
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
Torus
zf_CCCH_4
zf-CCCH_2
zf-CCCH_4
zf-CCCH_3
zf-CCCH_RBM22
Motif
Other DBs
NCBI-GeneID:
9939693
NCBI-ProteinID:
XP_020307346
UniProt:
A0A1S0UME9
LinkDB
All DBs
AA seq
292 aa
AA seq
DB search
MAAMTAMPYYHYSVFGSTPLTMEDYMSGISCALLDVEEMLLQQRGAREAPFSGMDKSGRG
VCIRNEQGTCIMGTVCPLRHIVGDKAVVCKHWLRGLCKKGDQCEFLHEYDLSKMPECFFF
SKYMACSNRECPFRHIDPESKIKDCPWYDRGFCRHGPFCKHRHRRRVLCPNFLAGFCMDG
RDCKYAHPSFNIPPVDTTQILRARGQYNIGIVCHNCHERGHKCGEKGHYANRCHKGLLAF
LSNTAYLAHEQREKDEKEARGNGQQFGSLGKPQQVPQCKVSNSTNKSGEMLR
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaatgacagcgatgccgtactatcattattcagtgttcggtagtactccactt
acaatggaagattacatgtctgggatatcatgcgctttactggatgtcgaggaaatgtta
ttacaacagcgcggagcaagagaggccccattttcgggaatggacaaaagtggtcgtggt
gtgtgtatacgtaatgaacagggtacatgtataatgggaactgtttgcccactgagacat
atcgttggagataaggctgtagtatgtaaacactggttgcgcgggctatgtaaaaaagga
gaccaatgtgaatttttgcatgagtacgatttaagtaaaatgccggaatgcttcttcttt
tcgaaatatatggcttgtagtaatcgtgaatgtccttttcgacatattgaccctgaaagt
aaaatcaaggattgtccgtggtacgaccgtggtttttgtcgacatggcccattttgtaag
catcggcatcgccggcgcgttctttgtcctaactttttggcaggcttttgcatggatgga
agggattgtaaatatgctcatccgtctttcaatattccacctgtggatacaactcaaatt
cttcgagcacggggacagtataacattggaatagtgtgtcacaattgtcatgaaagaggc
cacaagtgcggtgaaaaaggccattacgcaaatcgatgtcataaaggactgttggcattt
ctatcaaatacggcatatcttgctcatgaacagagagagaaggatgaaaaagaagccagg
ggaaacgggcaacaatttggaagtttgggaaagcctcagcaagtgccgcagtgtaaggta
tcaaattcaactaataaatctggtgaaatgcttcgttaa
DBGET
integrated database retrieval system