KEGG   Loa loa (eye worm): LOAG_16507
Entry
LOAG_16507        CDS       T02664                                 
Name
(RefSeq) hypothetical protein
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
loa  Loa loa (eye worm)
Pathway
loa03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:loa00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    LOAG_16507
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:loa03021]
    LOAG_16507
   03019 Messenger RNA biogenesis [BR:loa03019]
    LOAG_16507
Transcription machinery [BR:loa03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     LOAG_16507
Messenger RNA biogenesis [BR:loa03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     LOAG_16507
SSDB
Motif
Pfam: zf-CCCH Torus zf_CCCH_4 zf-CCCH_2 zf-CCCH_4 zf-CCCH_3 zf-CCCH_RBM22
Other DBs
NCBI-GeneID: 9939693
NCBI-ProteinID: XP_020307346
UniProt: A0A1S0UME9
LinkDB
AA seq 292 aa
MAAMTAMPYYHYSVFGSTPLTMEDYMSGISCALLDVEEMLLQQRGAREAPFSGMDKSGRG
VCIRNEQGTCIMGTVCPLRHIVGDKAVVCKHWLRGLCKKGDQCEFLHEYDLSKMPECFFF
SKYMACSNRECPFRHIDPESKIKDCPWYDRGFCRHGPFCKHRHRRRVLCPNFLAGFCMDG
RDCKYAHPSFNIPPVDTTQILRARGQYNIGIVCHNCHERGHKCGEKGHYANRCHKGLLAF
LSNTAYLAHEQREKDEKEARGNGQQFGSLGKPQQVPQCKVSNSTNKSGEMLR
NT seq 879 nt   +upstreamnt  +downstreamnt
atggcagcaatgacagcgatgccgtactatcattattcagtgttcggtagtactccactt
acaatggaagattacatgtctgggatatcatgcgctttactggatgtcgaggaaatgtta
ttacaacagcgcggagcaagagaggccccattttcgggaatggacaaaagtggtcgtggt
gtgtgtatacgtaatgaacagggtacatgtataatgggaactgtttgcccactgagacat
atcgttggagataaggctgtagtatgtaaacactggttgcgcgggctatgtaaaaaagga
gaccaatgtgaatttttgcatgagtacgatttaagtaaaatgccggaatgcttcttcttt
tcgaaatatatggcttgtagtaatcgtgaatgtccttttcgacatattgaccctgaaagt
aaaatcaaggattgtccgtggtacgaccgtggtttttgtcgacatggcccattttgtaag
catcggcatcgccggcgcgttctttgtcctaactttttggcaggcttttgcatggatgga
agggattgtaaatatgctcatccgtctttcaatattccacctgtggatacaactcaaatt
cttcgagcacggggacagtataacattggaatagtgtgtcacaattgtcatgaaagaggc
cacaagtgcggtgaaaaaggccattacgcaaatcgatgtcataaaggactgttggcattt
ctatcaaatacggcatatcttgctcatgaacagagagagaaggatgaaaaagaagccagg
ggaaacgggcaacaatttggaagtttgggaaagcctcagcaagtgccgcagtgtaaggta
tcaaattcaactaataaatctggtgaaatgcttcgttaa

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