Loa loa (eye worm): LOAG_16770
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Entry
LOAG_16770 CDS
T02664
Name
(RefSeq) hypothetical protein
KO
K11267
sister chromatid cohesion protein PDS5
Organism
loa
Loa loa (eye worm)
Brite
KEGG Orthology (KO) [BR:
loa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
loa03036
]
LOAG_16770
03400 DNA repair and recombination proteins [BR:
loa03400
]
LOAG_16770
Chromosome and associated proteins [BR:
loa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
LOAG_16770
DNA repair and recombination proteins [BR:
loa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
LOAG_16770
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
TOR1L1_N
HEAT
HEAT_GCN1
SCD
Arm
Motif
Other DBs
NCBI-GeneID:
9937863
NCBI-ProteinID:
XP_020307049
LinkDB
All DBs
AA seq
1414 aa
AA seq
DB search
MPSNAIKYPEGCKPISANVKNTELLKRLKVLSEVLKGEITNEEAGIPNRYKDLMLHLTDS
HFLSNKNSDVQLLLACCIADLFRVFAPNLPTENLSLLKDMLLFITTVIGNIPDKGSSMYQ
YYLYLLENISVVETMQIALELDDNAYVILRQLIKQSLNSVNEKNADEHVQGMLMGMCSKL
IQGVDQISNIVLDAIFFSSCSLKKFVFYLMVFSATSNGLINNREAYLMARDLIRTNQTTL
EPYVALLLKRGLETGVLDECELISQKKLCDLICELHKFAPEIISSVLPILVNQMHSEDAA
VRREAVRLFGNFFGDRDSRMAEDEPEVWSEYMKRFADVNEEIRRICIRNAEDILVFHPEL
RGQVTDAVILRCQDLDENVRLEVLSMVQGLVKRKFEALSERLLTHVVDRIRDKKVRVRHA
VIRGLSQLHRTIFSNDELTNLERSSVSSIFSAIMNHYYQPLLEDRLLTEKIFVSNLIPYK
LDEDKRMGILINVFLNMNSYGVKALEQVLMKQSFQRRLLRNLVKLIEQNVEPQKGKTIDD
VIKGIVECSPEPAKFSLLFRHFMVHLTNDRQILLLLKYITGKEYTCQKVESAVLEILQRL
RDHKVSVECLDAVRCLFECCSPLQFDGTAVSLLVDMVIKLIKESIDGNQFNRCYKLIKLL
KIVADAYPHCFVNGPALEGLVELIEIEGFSETESLLGLVIAISSELKQHELLAKGMVDKY
VKHCEYISLNGTPRAAKYAVRCISRLLNTEQARTKLESIFQDSLSHISASDPQCCTALKA
LSSCVEVDAVQFCNELLEILKTKVMDLLLDRSGGNIIFNQQSSVFNCSEQFGDGTVCDEI
YVEIKKHCLKFVANFLVSVARFSECDVEPLAKNLLKLYSTLLETKGDIFEKPCSRAHMAE
FRILAGNSMLKLATKPRYAKFVTADNLITLSALAYDEESEMRHRFFGKLNKHLMALQLHI
EYMGLFALVTLYEDVDFQNKIRVLVDANITKRRKYLERSEMKDFAPYYQPEYCLAYAIYI
LAKLPSFESIKCEPELLRLTESIWFLLEIFSARKEPGSLEFIYNIFKAVKNSTDSKLQGC
TKEELQQKNEKIWALCDIGILLMSYRVKNLMKDVESKPLLSKRFFLNMGKVNTKIYVPAS
FVKEMKTNKANTRKTDTMKKTTKSFVRHSLTNNPRYSTRVSSILKVGSERAVHKKRTNSN
HKAQTINLSFNNEIDVVVKRSKLVTEEEKQQQASSHWKTSLKDRKEMEKRPTPLKSLNNE
NKPETSKTNSNNEDGRNIRGSLEDCDYSPIRPVCIRNDITTRQSGFTSSTPIITVNRRRI
IVAGSKNSDVKHMVKNDAKVVATKKVRKADTENGGKCGEMRKLGGTQNAKLSGKRARAKI
MSDTNGIATRLRSRQTAISFPAQCPNMESMKKKK
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atgccttcaaatgctataaagtatcctgaaggatgtaaaccgatcagtgcgaatgttaaa
aatacagagttgttgaagcgattgaaggtcttgtctgaagtgttaaaaggtgagattaca
aatgaagaagctggtattccgaatcgttacaaggatttgatgcttcatttgactgattca
cactttttgagcaacaaaaacagtgatgtacaattgttgttagcgtgttgtatcgctgac
ctttttcgggtttttgcaccaaacttaccaaccgaaaatttgtctttgctcaaggatatg
ctactattcataacaacagtgattggaaatattccagacaaaggaagttcgatgtatcaa
tattatttatatcttctcgagaatatttcggtagtagaaacaatgcaaatagctctagaa
ttggatgataatgcttatgtgattctgcgccagttaatcaaacaatctcttaatagtgtt
aacgagaaaaatgctgatgaacatgtccaaggaatgcttatgggaatgtgttctaaactg
atccaaggagttgatcagatttcaaatatcgttttggatgcaatttttttttcatcgtgc
agcctcaaaaagtttgttttttacttgatggtgttttcagcgacatctaatggtttgata
aataatcgcgaagcttatcttatggcacgtgatttgattcggacaaatcaaacaacattg
gaaccatatgttgctttactgttaaaacgtggactagaaacgggcgttttggatgaatgc
gaattaatttctcagaagaaattatgtgatttgatttgtgagctacataaattcgctcca
gaaataatttcctccgtgcttccaatattagtcaatcagatgcatagtgaagatgctgct
gtacgtcgtgaagccgttcgtttatttgggaacttttttggtgatcgggattcgcgtatg
gctgaagatgaacctgaagtttggagcgaatatatgaaacgttttgctgatgtaaatgaa
gaaatccgtcgtatttgtatcaggaatgctgaagatattctcgttttccacccagaattg
agaggacaagtgacagatgctgtcattttacgttgccaagatctagatgagaacgttcgt
ttggaagtcctttcaatggtacaaggattggtaaaacggaaatttgaagctttaagtgaa
aggcttctgacgcatgtcgtcgaccgaattcgagataaaaaggttagagttcggcatgcg
gtgattcgtggactttcccagcttcatcgtacaatttttagtaacgatgaactgacgaat
ttggaacgttcctccgtatctagcatattttctgctatcatgaatcattattaccagcca
ctcttagaggataggttattaacggagaaaatattcgtctctaatctgattccatataaa
ctggatgaagacaagcgcatgggaatattgattaatgtttttctgaatatgaacagctat
ggtgtgaaggctttggaacaagttttgatgaagcagtcattccaacgacgacttttgcga
aatctggtgaaattgattgagcagaatgttgaaccgcaaaagggaaagacaatcgatgat
gttatcaaaggtattgttgagtgcagtcctgaaccagcaaagttttcgttacttttcagg
cattttatggtacacttaacgaatgacagacagatattattgttgttgaagtatattacg
ggaaaagaatacacttgccaaaaggtcgagtcagctgttctggaaattttacaacgttta
cgagaccataaagtatccgtagaatgtttggatgcggtgagatgtttgtttgaatgctgt
tcaccacttcagtttgatgggacggcggtatcgctgttagttgatatggtaataaaatta
attaaagagagtatcgatggtaatcaatttaatcgttgctacaaattaattaagcttctg
aagatagttgcagatgcatacccacattgttttgtaaatggacctgctttggaaggccta
gtggaactgatcgaaattgaaggcttttccgaaacagaaagtttgctcgggctagtgatt
gcgatttctagtgaactcaaacagcatgaactcctggctaagggtatggttgataaatat
gtgaagcactgtgaatacatcagtctgaatggcactccgcgtgctgcaaagtatgctgta
cgctgtatttcaaggttattgaacactgaacaagctcgaacgaagcttgaaagtatattt
caggattctttatcgcatatttcggcatctgatccacagtgctgcacagcacttaaggca
ctaagctcttgcgtagaagtggatgctgtgcagttttgcaacgagcttcttgaaatactc
aaaacgaaagtaatggatttattgcttgatcgaagtggcggtaatataatttttaaccaa
cagagcagtgtttttaactgcagtgagcagtttggtgatggaacagtttgcgatgaaatt
tatgttgagattaaaaaacattgtttgaaattcgtcgcgaattttttggtgtccgtagca
cggttttcggagtgtgatgttgaaccactggctaaaaaccttttgaaactctattccact
ttgttggaaacgaagggagatatcttcgaaaaaccatgtagccgagctcacatggctgaa
tttcgcatattggcaggaaattcaatgttaaaacttgcaacaaaaccacgatacgctaaa
tttgttactgccgataatttaattactctctcggcacttgcttatgatgaagaatctgaa
atgcggcatcgattttttggtaagcttaataaacacttgatggctcttcagttacacatt
gaatacatggggctgtttgcacttgttacgttatatgaagatgttgattttcaaaataag
atacgtgttttggtagatgcgaatataacaaagaggcgaaaatacttggaaagatcagag
atgaaagacttcgcaccatactaccaacctgaatattgtctcgcatacgcaatttacata
cttgcaaagcttccatcatttgagtcgataaaatgtgaacccgaattactgcggttgaca
gagtctatctggtttttgttggaaattttcagtgcgagaaaagaaccaggtagcttggaa
tttatttacaacatattcaaggcagtaaagaacagcaccgattcaaagttacaaggctgt
acaaaggaggagctgcaacaaaaaaatgagaaaatatgggcgttgtgtgatattgggata
ttgttaatgtcttatcgtgtgaagaatttaatgaaagatgtggaaagtaaacctttgctg
agtaaaagattctttttgaacatgggaaaagttaataccaaaatatacgtgccggcatcc
tttgtcaaagaaatgaaaacaaacaaggcaaatacaaggaaaactgacacgatgaaaaaa
acgactaagtcatttgtacgacattccttgacaaataatccaagatattctacgagggta
tccagtatcctgaaagtcggcagtgaaagagcggttcataaaaagcgaactaattcaaat
cacaaggctcagacgatcaatctttctttcaataatgaaattgatgttgttgttaaacgt
tcaaaacttgtaactgaggaagaaaaacaacagcaggcttcctcacattggaaaacatcg
ttgaaggacagaaaagagatggagaagcgaccaactccactaaaaagcttaaataatgaa
aacaaacccgaaacgtcgaaaacaaattctaataacgaggacggtcgaaatattcgcggc
tcgttagaagactgcgattattcaccaattcgtccagtttgcataaggaatgatatcact
actcgtcagtcgggatttacgagttcaacaccaatcatcacggtcaacagacgtcgaata
atcgtagccggaagcaaaaatagtgacgttaagcatatggtaaaaaatgatgctaaggtg
gtggcaaccaagaaagtgcggaaagcagatacagaaaatggcggcaaatgtggtgaaatg
agaaagttaggcggtactcagaatgcgaagttgtcaggtaaaagggctcgagcaaaaata
atgtccgatacgaatggcatagcaacacgactgcgttcacgacaaacggcaatttcattt
cctgctcaatgtccgaatatggaatcaatgaagaagaagaaatga
DBGET
integrated database retrieval system