Loa loa (eye worm): LOAG_16791
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Entry
LOAG_16791 CDS
T02664
Name
(RefSeq) DEAD box ATP-dependent RNA helicase
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
loa
Loa loa (eye worm)
Brite
KEGG Orthology (KO) [BR:
loa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
loa03041
]
LOAG_16791
03016 Transfer RNA biogenesis [BR:
loa03016
]
LOAG_16791
Enzymes [BR:
loa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LOAG_16791
Spliceosome [BR:
loa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
LOAG_16791
Transfer RNA biogenesis [BR:
loa03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
LOAG_16791
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
Motif
Other DBs
NCBI-GeneID:
9945598
NCBI-ProteinID:
XP_020307036
UniProt:
A0A1I7VS84
LinkDB
All DBs
AA seq
728 aa
AA seq
DB search
MTAFEELGMLPELGRAVDEMEWTLPTDIQSEAIPAILGGGDVLMAAETGSGKTGAFCLPV
LQIVWESLRDSMLNKTHKPTNSIDERWCLNVHDRDNNLAIDPSGLLCQSRDPKAWNGTRC
THGVVGKGKFYYEGTITDDGLCRLGWSTANAVLDLGTDKNSFGYGGTGKKSYNKQFDNYG
TSFTLGDIIGCMLDLDNGIIAFSKNGKHLGKAFDIPDTLRNAALYPAVVLKNAEIRFNFG
ETEFKHLFEGYIAVCKASPENTVISPNGSSANESKKIAEPNAPACIILEPTKELAEQTDG
QLKTFKKYLKQPTIRNGLVIGSIPVNEQLGIIMSGIDIITCTPGRLEDFIQSGKILLSNV
RFFILDEADSLVSAKNHLPTIERIHAALPKITALGERLQMIVCSATLHNFDVKKLADRMM
HFPQWVDLKGQDSVPETVHHVVCKIDAKTDRMWIRLKPQERIQTDGIHTNDEIRPGSDYP
ETLSEGTKILKGEYVLKAIRQCNMDQGIIFCRTKLDCDNLERYLRRKAQDLTCVCLHGDR
RPDERTRNLDAFKKGKAKFLICTDVAARGIDVKGIPFVINVTLPDEKANYLHRIGRVGRA
ERMGLAISLVSAHPEKVWYHKCPSRGVNCFNTALITQRGCAIWYDEPKLLEDIEEHLGVT
VPQIDTDFIVPVDEFDGKVVYGAKRTNTGSLYEGHAVQLSGAVAQLADLERSLQLSYLRM
FIASEKVK
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgacagccttcgaggagttgggcatgttgccggaattgggcagagcagtggacgaaatg
gaatggacgttgcctacagatattcagtccgaagcaattcctgcaattcttggtggcggt
gatgtacttatggcagcagaaacaggaagtggcaaaacaggtgccttttgtctacccgtg
ctgcaaatcgtttgggaatccttacgggattcaatgttgaataaaacgcataaaccgact
aatagcattgatgaaagatggtgcttgaatgtgcatgatagagataacaatcttgcgatt
gatccgagtgggttactttgtcaaagtcgcgatccaaaggcatggaatgggacacgctgt
actcatggtgttgttggcaaagggaaattctactatgaaggaacaataactgatgacggg
ttatgtcgtctgggatggtcaactgcgaatgctgttctcgacttaggtaccgacaaaaat
agtttcggttatggtggcacgggaaaaaaaagttacaacaagcagtttgacaattatggt
acttcgttcacgttgggtgatattattggttgcatgttggatttggataatggaattatt
gctttttcaaaaaatggcaagcatttagggaaagctttcgatattccggatacattgcga
aatgcagcactatatcctgctgtagttttgaagaatgccgaaattcgattcaattttggt
gagacggagttcaaacatctttttgagggctacattgcggtatgcaaggcatcacctgaa
aatactgtgatctcgcccaatggctcaagcgctaatgaatcgaaaaaaatagcggagcca
aatgcaccagcgtgtatcatacttgaacccacaaaggaattggcagagcaaacagatggt
cagttgaaaaccttcaaaaaatatcttaagcagccaactatcagaaatggacttgtcata
ggcagtattccagtgaatgagcaattaggaattatcatgtcgggcatagatataattaca
tgtacaccgggaagattagaagatttcatccagagtggaaaaattctattatccaatgtt
cggttcttcattctagacgaagccgattcgttagtatcggcaaaaaatcacttgcctact
atcgagcgcatccatgcagcgctgccgaagataacagctttaggagaacgtttgcaaatg
attgtttgttcggcgacgctccataattttgatgttaagaaacttgctgatcgcatgatg
cattttccacagtgggtggatctcaaaggacaagattctgtaccggagaccgttcatcat
gttgtttgcaaaattgatgccaaaacagatcgtatgtggatacgattgaaaccacaggaa
aggatacagactgatggcattcatacaaatgatgaaattcgtcctggaagcgattatcca
gaaactctttcggaaggcacgaagattctaaagggtgaatacgtcttgaaggctattcgc
cagtgcaatatggatcagggcatcattttttgccgcacaaaacttgattgcgataatctg
gagagatacctgagacgtaaagcacaagatcttacatgtgtttgtctacacggtgatcgt
cgacccgatgaaagaacaagaaatttggatgcgtttaagaaaggaaaagcgaaattcctc
atttgcactgatgtcgctgcacgtggtatcgatgtgaaaggcattccatttgtgattaat
gtaacattaccggatgaaaaagcaaactatcttcaccgaattggtcgtgtaggccgtgca
gaaaggatgggtttggcaatttctctagtttcggcacatcccgaaaaagtatggtatcat
aaatgtccttcacgtggtgttaattgtttcaatacggctttgataacacaacgtggttgt
gcaatttggtatgacgaaccgaaacttttggaagatattgaagagcatttgggtgtaaca
gttccacagatcgatactgatttcatcgtaccagttgatgaattcgatggtaaagttgtt
tacggagcaaagcgaactaatacgggctctctttacgagggacacgcagtacagctgtcg
ggagcagtggcacaacttgcagatttggaacgttcattacagctatcatacttgagaatg
ttcattgcttcagaaaaggtcaaatag
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