Loa loa (eye worm): LOAG_16933
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Entry
LOAG_16933 CDS
T02664
Name
(RefSeq) CCR4-NOT transcription complex subunit 2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
loa
Loa loa (eye worm)
Pathway
loa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
loa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LOAG_16933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loa03019
]
LOAG_16933
Messenger RNA biogenesis [BR:
loa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
LOAG_16933
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
LOAG_16933
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
9942073
NCBI-ProteinID:
XP_020306872
UniProt:
A0A1S0UMH2
LinkDB
All DBs
AA seq
377 aa
AA seq
DB search
MSSSGGVLADRNRLSSQSSASSACRNSLIPPENVINESEFPSLVVRSSPSSTSSAFNSLP
TTSNYSSSPPVPQNHLYSKDVYNALQRAPYANLMRTSDGNSLPTQNVEFRIQNEDFPALP
GANHLENRQTHVRTANNADALASETKYSERSNTETKTGIQTFPDGTVKNIPVGMLSDQFG
MAGLLTFLRAIESDPAIVALALGHDLTTLGLNLNSTERNIYATFGGPWADYPCRIQDLEA
KVPDEYLTNASIRDKLPNIKLSKLSEDVLFYLFYNCPGEVYQVAAASELYSRDWRFHKGQ
RVWLTRSQYGGVKEQTSTYEKGSYNVFDPVQWRKIPRDMTLEYKELEERPKLPQSLQQSG
QPQVAQSPSTATSQNGS
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtagtggaggtgtattggctgaccgtaatcgactttcatcgcagtcttcagca
tcatcagcttgtcgtaattcgttaattcctccggaaaacgttatcaacgagtcagaattc
ccatccctagtagtacgctcctcaccctcctcaacgtcctctgcatttaattccttgccg
accaccagtaattactcctcctcaccacctgtaccacagaatcatctttattcaaaagac
gtctacaatgctctacaacgagccccttacgcgaatttgatgcgaacaagtgatgggaat
tcgctaccgacacagaacgtcgagttccgtatccagaacgaggatttccctgcactacct
ggtgccaatcatctggagaataggcagactcatgtaaggactgcgaacaacgccgatgca
cttgcctcagaaacaaagtactccgaaaggtcgaacactgagacgaaaacaggtattcag
acatttccggatggtacagtgaagaatatcccagtaggcatgttgagtgaccaatttggt
atggcaggactgttgacgtttttgcgtgcaattgaaagcgatcctgctattgttgcactt
gctcttggtcatgatttgacaactctgggcctgaatctgaactccactgagcgaaacatt
tatgcgacgtttggaggaccatgggcagattatccatgtcggatacaggatttggaggca
aaggtaccagatgaatatttaacgaatgcttcgattcgagataaactgccgaatatcaaa
ttgagcaagctatcggaggatgtgctgttctacctcttttataattgtccgggcgaggtt
tatcaggtcgccgctgctagtgagctgtatagtagggattggcggtttcataaaggtcag
cgtgtttggctaacgcgatcgcagtatggaggtgtcaaggagcagacatcaacgtatgaa
aaagggtcctacaatgttttcgatcctgtacagtggcgaaaaataccgagagacatgaca
ttggagtataaagagcttgaagaacgaccgaaattgcctcagtctttgcagcagtcaggt
cagccacaagttgcacaatcaccctctacagccacgtcgcaaaatggttcatag
DBGET
integrated database retrieval system
