Loa loa (eye worm): LOAG_16950
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Entry
LOAG_16950 CDS
T02664
Name
(RefSeq) tRNA modification GTPase TrmE family protein
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
loa
Loa loa (eye worm)
Brite
KEGG Orthology (KO) [BR:
loa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
loa03021
]
LOAG_16950
Transcription machinery [BR:
loa03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
LOAG_16950
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med23
DUF5958
Motif
Other DBs
NCBI-GeneID:
9943321
NCBI-ProteinID:
XP_020306852
LinkDB
All DBs
AA seq
1252 aa
AA seq
DB search
MSTNMEATTTSSVSLTAAVGNDAEKLQWIVLNQVEGVQMREMFWDLSKDVDVDVLACSEA
IKLLRTMTEEEKAQCCKASLTLLSNKDDPRHIHYERILSSIFMSACNEGVLPLSDCCELL
ILCTNFTLTTPIDSRKFEYMQKNLHLIDYKGLRNILKLLVVERMQEVPSTITHHHRHMLL
PVENMLLTLIDRQLNLLPCIFTITELHRVSSNSRAFLLPRVAKKFNDMFISFRPLTEMVT
IIGRSWLYPVAAHISFPVSTPSWKLEVTTTRLHQRAHLPYKSELFAPQSFLLYTLLRQPR
GKDTISYVMRQNTNLTPQRLQCDELLHMIILEAMSEMEKTDTRLDDPANQYQWMNITQTV
TFSLLHGNASFSRLLKILYESLSETVYRKGRDELMWVILQYVAVYIDRVSNEEMIRVAEI
YNLLYSDEQTWSGADTDPLLFVRFLVPAAIWIHFYKKLGNSHTEVLPKPSESLWRQIQFL
QERTADSDPNIQNVADHNAVLAAVANAYSSDMPNFQKLVLTAVDVFLDGSPEEMNTVWHL
PHGIISYSKKTPLPLSLIDSLTFHARNHLFQLCLLKLTAMLSVQQTQKLPSPATIDTLVR
LAVTTEFEYGVKQVLALLSSTLASVNKNSNLGPVQQDRSRDLLFVLCDILSYRFISYALP
VGSKVNLMLWCYTALGNNQVQMNIALCSALEQVMLRYWMWNSPQEMFYLSNAFLGKQGKL
AVIFNTANPAFCDPQHGNVPIEQQYTNSHLSLELLRCLLLSMFRSLKMTGMEMTTEMMQR
CNVNFCWPLSINRTYSSQLTGCNIDDGAADTVMYDELMHRVIQEVHQAQEIIYAQGLAAE
EQLLKFFSGERKQTVFCVVYNMLFETKKIHPVIYSVLNSMNSKELTATVNKFTDYFIFIF
KKNLPSDDQQFAAMIGILNDMVFNLHLISLDRLLLSLVLHPTDDGATEIAMLIIHSLVGS
YPDLHNRITALVHIIPSNKIGNTSAAFFNKMSEYYSQFPELSYREMEAKMRREMQIELGM
RPIEQPTLSPELHMPIYYGNIVERILPIVDIILFRAIETVVADQLFTTLLMCFKPCYRYH
PQPAAYMYSVLYCLDKTISHTVRARDFVLEICGQLEDRDGKYALLTPSFISDNHQLSLPS
QFCQALVDRILQASNYAHQPPAFAYKDWRFAEMPPAGQALTGACIELLASPHAPVITAHA
LIDLVFIRPLHQPYATINAVALILTALPVSFQQVFYDHIVSVLDSEALHDFR
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgagtactaatatggaggcaacaacaacatcatctgtctcgcttacagcagcggtcggt
aatgacgcggagaaattacaatggatcgtattaaaccaagtggaaggagtacaaatgcgt
gaaatgttctgggatttaagtaaggacgttgacgtagatgtgctggcatgcagtgaagcc
atcaagctgttgcgcacaatgactgaggaagagaaggcacaatgttgcaaagcatccctt
acgttgctttcaaataaggatgatcctcggcatatccattatgagaggattttatcttcg
atatttatgtctgcctgcaatgaaggcgtccttcctctttccgattgctgtgaacttctt
attctttgcaccaacttcactcttacgacgccaatagattcgcgcaaatttgaatacatg
cagaaaaatttacatctgatcgattacaaaggtcttcgaaacattttgaagttacttgta
gttgaacgcatgcaggaagttccgtctaccattacacatcatcatcgccatatgctttta
cctgtagaaaatatgttgctaactttaatcgatcgacagctaaaccttcttccatgcatt
ttcacgattactgagctacatcgtgtttccagtaattcacgtgcctttcttttgccaagg
gtggcgaaaaaattcaacgatatgtttatttcttttcgaccacttaccgaaatggtaaca
ataatcggtcgttcatggctttatccagtagctgctcacatttcttttccagtgagtacg
ccatcttggaagcttgaggtcacaactactcggttgcatcaacgagctcatcttccgtac
aaatctgagcttttcgctccgcagtcttttttactttatacgcttctccgacagcctcgc
ggaaaagacacaatttcttatgtgatgcgacagaatacaaacttgaccccacagcgacta
cagtgtgatgagttgctgcacatgatcattctcgaggctatgagcgaaatggaaaagacc
gatacgcgccttgacgatcctgcaaaccaatatcagtggatgaacattacgcaaacagtt
acattctcgttacttcatggaaatgcctccttttctcgccttcttaaaatattatacgaa
tcactttctgaaacagtgtatcgaaaaggaagagatgagctgatgtgggttattttgcaa
tatgttgcagtttacatcgatagagtatcaaatgaggaaatgattcgtgttgccgaaatt
tataatttactttacagtgatgagcagacatggtctggtgcagacacagatccattgctg
tttgtccgattcctggttccggctgctatttggatacatttttacaagaaattaggcaac
tctcatacagaggtacttcctaaaccctccgagtctctgtggcgacaaatacagtttctg
caggaaagaacagcagattcagatcccaatatccaaaatgtcgctgatcataatgcagtt
ctggctgctgttgctaatgcttacagcagcgatatgccgaatttccagaaactagttctg
acagcagtggatgtctttctggatgggtctccggaagaaatgaatacagtttggcattta
ccccatgggatcatttcctattcgaaaaagacacctttaccactttcattgatcgattct
ttaactttccatgcacgaaatcatttattccagctttgtttattgaaacttacagctatg
ctttcagttcagcaaacacaaaaattgcccagtcctgcaacaatcgatacacttgtacgt
ttggcagtaactacggagtttgaatatggcgtgaaacaagtattagcgttgctgtcctcc
acattagcttcagtaaacaaaaacagcaatttgggaccggtacagcaagatcgatcccgg
gatttactttttgttctttgtgatatcctttcatatcgattcatcagttatgcattgcca
gtgggatcaaaggttaatttgatgctttggtgttacacagcacttggaaacaatcaagta
cagatgaatattgcgttgtgctcggctctagaacaagttatgctgcggtattggatgtgg
aattcgcctcaagaaatgttttatctgagcaatgctttccttggcaaacaaggcaagctg
gccgtcatattcaacacagctaatccggcattttgtgatccgcagcatgggaatgttccg
attgaacagcagtatacaaattcacatttatccctcgagttgttacgatgcttacttctt
tccatgttcagatcactcaaaatgacagggatggaaatgactacagaaatgatgcagcgc
tgcaatgtgaatttctgctggccgctgtcgattaatcgaacatatagttcccaactcact
ggctgcaacatagatgacggtgctgcagatacagttatgtatgacgagctgatgcatcgt
gtcattcaagaagtgcatcaagcacaagaaattatttatgcgcaaggtttagctgctgag
gaacagctgttaaagttcttttcgggtgagcggaaacaaacggttttctgtgttgtatac
aatatgctgttcgaaacaaagaaaatacatccagtaatttattctgtgttgaactcaatg
aacagtaaagaactcacagcaacggtaaacaaattcacagattatttcatatttattttc
aaaaagaatctcccttcagacgatcagcaattcgcagcaatgattgggattttaaatgac
atggtatttaatttacacctgatatcgctcgatcggttgcttctttctcttgttcttcat
ccaaccgatgatggagccaccgaaattgctatgcttataatccattctttggttggctca
tatcctgatttgcataatcgaattacggcgttggtgcacataattccatcaaataaaatt
ggcaacactagtgctgcattttttaataaaatgtcagaatattactcgcaattcccggaa
ctgtcatatagagaaatggaagcaaaaatgaggagagaaatgcaaattgaactaggtatg
cgaccaatcgaacagccaactcttagtccagaacttcatatgccaatttactatggtaat
attgtggaacgcatacttccgattgtagacatcattttattccgtgcgatagaaactgta
gttgctgaccaactatttacgacactgctgatgtgcttcaaaccctgctatcgatatcac
ccacagccagcagcttacatgtacagtgtcttgtattgcttggacaaaaccatttcacat
acagttcgtgccagggattttgtgctggaaatttgtggacagctggaagatagggatggt
aaatacgctctcttaacaccatcatttatttccgacaatcatcaactgtcactgccttct
cagttttgtcaggcattagtggatcgcattttgcaagcttccaactacgctcatcagcca
ccagctttcgcttacaaagactggagattcgcggagatgccacctgcagggcaagccctc
actggcgcatgcatcgaactgcttgcatctccacatgcaccagtgattacagcccatgca
ctcattgatttggtctttattcggcccttacaccaaccatatgccactatcaatgcagtc
gctctgattctgacagcccttccagtttctttccagcaagttttttatgaccatattgta
tctgtgctcgattcggaagctctgcatgattttaggtga
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integrated database retrieval system
