Loa loa (eye worm): LOAG_16958
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Entry
LOAG_16958 CDS
T02664
Name
(RefSeq) hypothetical protein
KO
K12876
RNA-binding protein 8A
Organism
loa
Loa loa (eye worm)
Pathway
loa03013
Nucleocytoplasmic transport
loa03015
mRNA surveillance pathway
loa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
loa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LOAG_16958
09122 Translation
03013 Nucleocytoplasmic transport
LOAG_16958
03015 mRNA surveillance pathway
LOAG_16958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loa03019
]
LOAG_16958
03041 Spliceosome [BR:
loa03041
]
LOAG_16958
Messenger RNA biogenesis [BR:
loa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
LOAG_16958
Spliceosome [BR:
loa03041
]
Complex C
Other components
EJC/TREX
LOAG_16958
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Nup35_RRM_2
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
31251522
NCBI-ProteinID:
XP_020306824
LinkDB
All DBs
AA seq
159 aa
AA seq
DB search
MAVVTGDSIEVDDDMELEHTDQIDDLKSRATKKKGRGFGGETHADVTEYEGLESTAGANN
PNAPQRSVEGWIVFVTNVHEEAHEDDVYERFSEYGEIKNMNLNIDRRTGFLKGYALVEYE
TQKEALAAIESLNGAELLGQTINVSWCFVRGSAQKKRRR
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgtgacaggagatagtattgaggttgacgacgacatggagctcgaacataca
gatcaaattgatgatttaaaaagtcgagcgacaaagaaaaagggacgtggttttggcggt
gaaacgcatgctgatgtcacggaatatgaaggtttggagagtacggctggtgcaaacaat
ccaaatgcccctcaaagatcggtagaagggtggatagtttttgtgacaaatgttcatgaa
gaagctcatgaagatgacgtatatgaacgattcagcgaatacggtgaaattaaaaatatg
aatttaaacattgaccgacgaacgggcttcctaaagggatatgcattggtggaatacgag
acgcagaaagaagctcttgctgcgattgaaagcttaaatggagcagaattgcttggacaa
actataaacgttagttggtgctttgtgcggggcagtgcgcagaagaagaggcgacgatga
DBGET
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