Loa loa (eye worm): LOAG_17240
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Entry
LOAG_17240 CDS
T02664
Name
(RefSeq) S1 RNA binding domain-containing protein
KO
K14792
rRNA biogenesis protein RRP5
Organism
loa
Loa loa (eye worm)
Brite
KEGG Orthology (KO) [BR:
loa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
loa03009
]
LOAG_17240
Ribosome biogenesis [BR:
loa03009
]
Eukaryotic type
90S particles
Other 90S particles
LOAG_17240
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
HAT_Syf1_CNRKL1_C
HAT_PRP39_C
TPR_19
HAT_PRP39_N
Suf
HAT_Syf1_CNRKL1_N
OB_RRP5_4th
TPR_16
ARM_TT21_5th
TPR_2
UTP6_C
RNase_II_C_S1
HEAT_Nup120
TPR_6
TPR_CcmH_CycH
TPR_15
DUF7017
ARM_TT21_2nd
SPOB_a
Motif
Other DBs
NCBI-GeneID:
9942487
NCBI-ProteinID:
XP_020306508
UniProt:
A0A1S0UIZ7
LinkDB
All DBs
AA seq
1790 aa
AA seq
DB search
MEIDFPREDLSVSRKRRGIYSGDNETTNVKQQSIKNEPKSEYDGVWNQRITPNFLTEGML
GLGVVMKIKEAEILLECLDGVVVKVPVQNFGNLMLGTLRSSSLTLEDVFKKVRSEQFVAV
DSKEKKKASYPVVSCDPLIVNVHLNPGALINGLVLNGVVESVEDKGVIINLGLQSVELKG
FLAEKHLPPTFQKESLIEGQPLLLRIQNENSSNKKSRVVSLSAVPEMECLDDIAVKNLKL
NDLMPGTLLLVNPLQPTASGVYVNIGNDIKGYVNRQHLPPRYRNDSFKCLKSFKTIVMFC
QQNSNLLALNGHPDIIAASKFAKRTNFENVHTGDIIECKVSNVNKNGDVNFDLVLHGDER
NSLVAAFARKTELEDHVEYKKGTIHQTRVLSFKMVERILIVATRKDILAQKMVCVKDAVP
GMKVIAKVESVLPKGLFVKIYNSIPGFIPKIHLSDKLITRIDKHFAVGDELTCRILTVNE
AKERLILTNKQSLTTNKDTVIKSYAEVTTNAITTGYIVSQHPSGGLIIGFYGGTRGFMFP
KETERLGTNIKVGLTVRVRVVSVDPQRGRMLVAVANAANDGTEIAKAQPFLIDGGNSVSF
SAVVMNILSNDNKSKPNEILNVTVRLGKKLGGKVKAFIPKELLSDCLDLPFASLSESIAL
GSVLPKVTVLGDVAGNLKVTSKRFMIDWLEKHPRITGLQNLTKGELVCGNIIRKHKEMGY
FVELAGGSALTAPARFIRPMALPVSMQELQIGQTVVARVSSVDLERKRFALILDAHLCIP
PGAELDYFAPSIVHYSLEELNWFIANNPNYSQVPEIGECIDIKVVEISECSVVVQYASNP
DLKGCAINNTNILQKGSCAKALVLDVKLPTCELVLFLLDGGVQHLNEKKLQSLLCSKKEF
DAKIWLHKREYAVATVETEKSAFVVSIPMRLHPNVNITSVDLDENSNQCIITPKLISGNV
MIGTAMEILKKYGLIHRKFKTPIKSAVKKKLKQFKIYTAKVMGMWSKGDLYNAIELELPD
GSIGRLHASEFDESFLDQTSQPIQSFLKKRKGKTVNVKIMCFTKLKQKMEKLDLSKPRGK
GTQKGEKMVVVTRLAECTMKTWKLSETKRKQSLLGYPQSYVHGSFIPVFVCNGPHVGVVR
VEVSPLWNGVIRKQNLYDENLLANPTNNDASALVDIDFEPGEKLIAQVIGVNVYKNRRGK
LRHRKCLEMTLKKNTKENRSLQTFEHGDRVTGRVVGITQSPSSVILELTNNQRAVLTLTG
ITDNYLNAHEAVKSYELNQIYNVHLLRFDNDKGRWLAVTESRFSKKSKNMLYRSGTDIEI
SSKLQAFVTSASDDAHIFVEISPGITGCVSRCKKLSLKPDDLITVRVSHTFADGGLKVEF
VDLIAEGPPDEKPRKRLISVGSGSDIAVDLPRKKSKAAGYVASHLKENEPPQVTVVEAKL
PEPGLDWSLKGFTPAEFAKVGQLGQKVDVPVSTSIAKDESSADNIEEQNRPKTKEELQIE
EEKKLINRERKILEANWIPDNTNDFDRLVAGTPNSSILWIRYITFFLEQNDVEKARAVAD
RALSVINFREEDEIFNVWTAYLNLEGNFGTSESLKAVFDNAIKNTDALKMYKQMVKIYQN
LGKIQELDDLLDEMLKRFRHDDLDVWFIYGQHLLETKRPDKARDLMKKAINCLSRKHHVT
ILSRFAQLEFKFGDMEQSKTIFENILNSYPKKTDVWTVYIDLLIKVGKFEDARQLLERVT
ALKLSTHKIRLFFKKWVGLEQMHGDEEQQNNVKERALHYLQDVTGLIKET
NT seq
5373 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcgatttcccacgtgaagacttgtctgtaagtagaaaacgtcgtggaatatat
tctggtgataatgaaacaacgaacgtaaagcaacaatcaattaaaaatgagccaaagtct
gaatatgatggtgtatggaatcagcgtataactccgaactttctcactgagggaatgctc
ggattgggtgttgttatgaaaattaaagaagcagaaatactgctggaatgtttggatggt
gtagtcgttaaagtacctgttcaaaattttggcaacttaatgctgggaacacttagaagt
tcatctcttacattggaagatgtcttcaaaaaagtccgatctgaacaatttgtcgcagta
gactcaaaagaaaaaaaaaaagcttcatatcctgttgtcagttgtgatccattgattgta
aatgttcatctcaatcctggtgctctaatcaatggtcttgtgcttaatggtgttgtggaa
agtgtggaagataaaggtgttattattaatcttggattgcagtcagttgaattaaaagga
tttctagcagaaaaacatttaccgcctacttttcaaaaggaaagcttaatagaaggacaa
ccgcttttattgcgaatacagaatgaaaattcatcaaataaaaagtcacgagtcgtcagt
ctgtcggcggttcctgaaatggaatgtttggatgatatcgccgttaagaaccttaaactt
aacgatttaatgccaggaactttacttctagtaaatcctttgcaaccaactgctagtggt
gtttatgtcaacattgggaatgacataaaaggatatgtaaacaggcaacacttgccaccg
cgatatcgcaacgactcattcaagtgtttgaagtcctttaaaacaattgtgatgttttgt
caacaaaatagcaatttattagcattaaatggacatccagatattattgctgctagtaag
ttcgcaaaacgaactaattttgagaatgtccatactggtgatattattgagtgtaaggta
agcaatgtgaataagaatggtgatgtcaatttcgatttggtactacatggagatgaaaga
aattcgctggttgcagcatttgcgaggaaaactgaactggaagatcatgttgaatacaag
aagggaacaatacatcaaacacgtgtgctatcatttaaaatggttgagagaatattaata
gttgcgacacggaaagatattctagcacaaaaaatggtctgcgtaaaggatgctgttcct
ggtatgaaagtcatcgcaaaggtggaatctgtgctacctaagggattgttcgtaaaaata
tataattcgatccctggatttatacctaaaatccatctttccgacaaattgatcacacga
atcgacaaacatttcgccgttggtgacgagctaacctgtcgcatcttgactgtgaatgaa
gcgaaagaacgacttattctgacaaataagcagtctcttacaacaaataaagacacagtc
atcaagagttatgctgaggttacaactaatgcgataaccactggttacattgtttctcag
cacccaagtggtggactcattataggtttttatggtggaactcgcggatttatgtttccg
aaagagacagagcgattgggaaccaatataaaagttggtctcacagtccgagttcgagtg
gttagtgttgatccacaacgtggacgtatgttagttgcagtagcgaatgcggccaacgat
ggaactgaaatagcaaaggctcagccatttctaatcgatggaggaaattctgtctctttt
tcggcagttgttatgaatattttgtcgaatgataataagtcaaaaccaaatgagattttg
aacgttaccgttcggctagggaagaaattgggtggaaaagtgaaagcatttattccgaaa
gaactgttgagtgattgtcttgatttaccgtttgcgtcactaagcgaaagcattgcactt
ggaagtgtgctaccaaaagttacggtactgggtgatgttgccggaaatcttaaggtgacg
agtaaacgtttcatgatcgattggttagaaaaacatccacgcatcactggccttcaaaac
cttacgaaaggagaacttgtttgtggtaatatcatccggaagcacaaggaaatgggatat
tttgttgaattggcgggtggctcagctcttacagccccagcacgctttatacgtccaatg
gcactgccagtatcaatgcaagagcttcaaatagggcagactgttgtggcacgagtatca
tcagtcgacttggaaaggaagcgatttgctttaattttggatgcacatctctgcatacct
cctggtgctgaacttgattattttgcaccatctatagtacattattctttggaggaattg
aactggtttatagcaaataatccaaactattcgcaagtaccggaaatcggcgaatgtatc
gatataaaggtcgtagagatttcagaatgcagtgttgttgtgcagtatgctagcaatcct
gatttgaagggatgcgcgataaataacactaatattctgcagaaaggaagttgtgcgaag
gcattggttttggatgtcaaattgccaacctgtgaattggttctattccttctggatggt
ggtgttcagcatttgaatgagaagaaactacaatcactattatgcagtaaaaaggaattc
gatgcgaaaatatggttacacaaaagagaatatgcagttgcgacagtagaaactgaaaag
tcggcttttgtagtttccatcccaatgagattacatccgaatgtgaatattacttctgta
gatttagatgaaaatagcaatcaatgcataatcacacccaaactgatatctggaaatgtc
atgattggaactgcaatggaaatattgaagaaatacggactaattcatagaaaatttaaa
acacccatcaagtcagcagtgaagaagaaattgaagcagttcaaaatttacactgcaaaa
gttatgggaatgtggtccaaaggtgatttgtacaacgctattgagttagagttgcccgat
ggcagtattggacgtttacatgcatcggaatttgatgaaagctttttggatcaaacttca
cagccaattcaaagctttttgaaaaaaaggaaaggtaaaacagtcaacgttaaaattatg
tgtttcacgaagctaaagcaaaaaatggagaagttagatctttctaaaccaagaggaaag
ggaacacaaaaaggcgaaaaaatggttgttgtgacacgtttggcagaatgtacgatgaaa
acatggaaattaagtgaaacaaagagaaagcagtctcttctaggatacccacaaagttat
gtgcacggatcatttattcctgtttttgtatgtaatggacctcatgttggagtggtcaga
gtggaagttagtccactatggaatggtgtcatcaggaagcaaaatctgtacgatgaaaat
ctgttggccaacccgaccaataatgatgcatcagcattagttgacatcgattttgaacct
ggcgaaaagttaattgcacaagttatcggagtgaatgtttacaagaatagacgtggcaag
ttgagacatcgaaaatgtttggaaatgaccttaaaaaaaaacacgaaagagaatcgcagt
ttgcagacattcgaacatggtgatcgtgtgacgggaagagttgttggtattacacagtca
ccaagtagtgttatactggaacttaccaataatcaacgggctgttcttacattgactggt
attactgataattatctgaatgcacatgaagctgtaaagagttacgagttaaatcagatt
tataatgtgcaccttttgcgttttgataatgataagggtagatggcttgctgtcacggag
tcacgcttttcgaaaaaatcgaaaaatatgctgtatcgaagtggaactgatattgagatc
agttcgaagctccaagcgttcgtaacttcagcatctgatgatgctcatatctttgtcgaa
atcagtcctggtattactggttgcgtctcaagatgcaagaaattatcgttaaaacccgat
gatttgattacagttcgcgttagtcatacctttgcggatggtggcttgaaagtagaattt
gtcgatttaattgcagaaggccccccggatgaaaaaccacggaagaggctcataagtgtt
ggatctggatctgatatcgcagtcgatttaccacggaagaaatcgaaagcagctggttat
gtggcatctcatttgaaagagaatgaaccgccacaagttactgttgttgaagcaaaattg
cctgaaccaggtttggactggtctctaaaaggatttacaccagcagaatttgcaaaagta
gggcaacttggtcaaaaagtggatgttccagttagtacttcaatagcaaaagatgaatct
agtgctgataatattgaagagcaaaacagaccaaaaactaaagaggagcttcaaatagaa
gaggaaaagaaattaataaatcgtgaaagaaagattctcgaagcgaattggatcccagat
aacacgaatgattttgatcgtttagttgctggtacacccaattcttcaattttgtggatc
cggtatattacattctttctggaacaaaatgacgtggagaaagcaagggcagttgcggat
cgagcactttcagttatcaatttccgtgaagaggacgaaattttcaatgtttggacagca
tatctcaatttagaaggaaatttcggtaccagcgaatcgttgaaggcagttttcgataac
gctattaaaaataccgatgctttgaaaatgtataagcaaatggtgaaaatataccaaaat
ctaggaaaaatccaggaactggatgatttattggatgaaatgttgaaacggtttcgtcac
gatgacttggatgtttggttcatttatggacaacacttgctggaaaccaaacgtccagat
aaagcaagggatttgatgaagaaagcgatcaattgtttatctcggaaacaccacgtgaca
attttgagccgttttgcacaacttgaattcaaattcggtgatatggaacaaagtaaaaca
atttttgaaaatattttaaattcatatccgaagaaaacagatgtttggacagtctacatt
gatctgctgatcaaagttggaaaatttgaggatgcaagacagctacttgaacgagtcacc
gcactaaaattatccacccataaaattcgattatttttcaagaaatgggttggtctggag
caaatgcatggtgatgaggaacagcagaataatgttaaagaacgagcactgcactatcta
caagatgttacgggacttatcaaggaaacataa
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