KEGG   Loa loa (eye worm): LOAG_17406
Entry
LOAG_17406        CDS       T02664                                 
Name
(RefSeq) HMG box family protein
  KO
K09269  transcription factor SOX5/6/13 (SOX group D)
Organism
loa  Loa loa (eye worm)
Brite
KEGG Orthology (KO) [BR:loa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:loa03000]
    LOAG_17406
Transcription factors [BR:loa03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    LOAG_17406
SSDB
Motif
Pfam: HMG_box HMG_box_2 stn_TNFRSF12A
Other DBs
NCBI-GeneID: 9942120
NCBI-ProteinID: XP_020306303
LinkDB
AA seq 597 aa
MSGRRKTMPTRLLETVETYYPVATVESMPSTSTANGVQTVKGTLLITEPNKPVKMSTEKL
IMDNIVKQGEITKHRIMREFTSASSPRGQVDSLKSDTSSISEHTSTSGSAGVTDIPDILA
QTEHGCRVLIDGHALREVLNSVDTYDGKLDLVQDLIRQLKAVKERLSCGEIHISKEDIED
TSLKDTDELVAEAKEQNCFQRMSAGNLDEFMIRQQYFIQQQQNQQRLLAMASALHAAQHS
SAVRLGCMLPSATTYGQFLNGTTLGNDCGVRTAATVLSQSVNNEMNNVTNHLGTKGLDCI
DRNGCETPLNLSKVKLKSPTDHSKARKVTLLNSTSSKKPSSPFEQQIPNRLPCSSIPHSF
ASETSAFTSHSPGSSGESTPGGVVTSDSIPARIPAKSPNHIKRPMNAFMVWARDERRKIL
KACPDMHNSNISKILGSRWKAMSNTEKQPYYEEQSRLSKLHMEQHPDYRYRPRPKRTCVV
DGRKVRINEYKNLMRNKTVANSVGTTGCSSATSEWSSDVDQCGATVSPGSGSSQSLTVNS
NLLSTSAATAVILPENNSDATTHSRSFSSVDFASLNGATVLTNLAHHHHCHMLQTAE
NT seq 1794 nt   +upstreamnt  +downstreamnt
atgtctggtcgtcgtaagacgatgccaacaagacttttggaaaccgtggaaacttattat
ccagtagcaactgttgaatcaatgccaagtacttcaaccgctaatggtgttcaaacggtc
aagggtactctactgataacagaaccaaataaaccagtgaaaatgtccaccgaaaagctt
attatggacaacattgttaagcaaggagaaataactaagcatcgtattatgagggagttc
acttctgcttcatcacctcgagggcaagttgattcgttgaagagcgatacttccagcatt
tctgaacataccagcacgtcaggttcagccggagtgacggatatcccggatatcttggca
caaacggagcatggatgtcgtgtacttattgatggtcacgcactgcgtgaggtcctaaac
agcgtcgacacgtacgacggcaaacttgatctcgtgcaagatcttattcgacagttgaaa
gctgttaaagaacgtttgagctgtggtgaaatacatatcagcaaagaggatatcgaggat
acaagtcttaaagatacggacgaattggttgcggaagcgaaggaacaaaactgttttcag
agaatgtcagctgggaatttagatgaattcatgattaggcaacaatactttatccaacaa
caacagaatcaacaacggttgcttgctatggcatctgcccttcatgctgcacaacattcc
agcgctgtacgattaggttgtatgctaccgtctgcaacaacatatgggcagtttttaaat
ggaacgacacttggaaacgattgtggtgttcgaactgcggcgacagtgctttcccaaagt
gttaataatgaaatgaataatgtaaccaatcatttggggacaaaggggctcgattgtatt
gatcgaaatggttgcgaaacaccgctgaatttgagcaaagtgaaattgaaaagtccgaca
gatcattccaaagcacgtaaagtaacactgctgaacagtactagttcaaaaaaaccaagc
tcaccatttgagcaacaaattcccaaccgactaccttgctcttcgatcccacattctttt
gcctccgaaacatcagctttcactagtcattcaccgggttcatcaggagaaagcacacct
ggaggggtggtgacttcagatagtattccggctcgaattcctgccaagtcaccgaatcac
atcaaacgcccgatgaatgccttcatggtctgggcacgtgatgagcgaaggaaaatcttg
aaggcttgtccagatatgcacaacagtaatatttcaaaaatccttggatcgaggtggaag
gcaatgtctaatacagagaagcagccatattacgaagaacagtcccgattgagcaagttg
catatggagcaacatccggattatcgttacaggcctaggccgaaacgaacatgtgtggtc
gatggcaggaaagtacgtatcaatgaatacaagaatttaatgagaaacaaaacagtggca
aattcagttggtaccactggttgttcgtctgctacaagtgaatggagtagtgacgttgat
cagtgtggagcgactgtgagtcctggatctggttccagtcaatccttaacagttaacagt
aatctactatctacatcggcggcaacagcagtgatacttcccgaaaataatagtgacgct
accacacattctcgatcattctcatctgtcgattttgccagtctcaatggcgctacagtg
ctcaccaatctagcccatcatcatcattgccatatgttacaaaccgctgaatag

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