Loa loa (eye worm): LOAG_17414
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Entry
LOAG_17414 CDS
T02664
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
loa
Loa loa (eye worm)
Pathway
loa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
loa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
LOAG_17414
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
loa02000
]
LOAG_17414
Transporters [BR:
loa02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
LOAG_17414
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
9951659
NCBI-ProteinID:
XP_020306295
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All DBs
AA seq
545 aa
AA seq
DB search
MLFIGGLPVFYMELVLGQFHRSGCISIWKKICPMFKGIGYGICFICTFIACFYNAVIAHA
LYFLINSLQSEVPWKNCNNPWNTPLCAINLNGLNGTIVTNQSNNLSGKLRTPSEEFFLFN
VLEENHSRGFDDLGSIKPSLALCLIIVFILVYFALWKGPRSSGKYVWITATAPYVILSVL
FVRGITLPGASIGIYYYLMPNFEMLFDIDVWTAAATQIFFSLGPGFGVLLALSSYNDFRN
NCYRDALVTSFINCGTSFFAGFVIFATLGYMSTITNLPVNEVVGDNDANIIFIVYPQAIA
TMSYANCWSFIFFVMLITLGIDSTFSGIEALITGFCDEYPDVLARKREIFVGIVIVAYYF
GSLPTVTYGGKYVISFLDEYGVSLSVLFIVMCEMVAVCWFYGIRQFSKDIQTMLGFYPGL
YWRFCWTCCPIIITTIFLLTIYKTSLEPMTIGSYTYPQWTVYLGWFLRLTSILSIPIFAI
YYLCTTKGTLKERWQSSIKPQQTDHLRRSSLVHSVVLPDVSMIRIDNNASDISETTMAIN
NTIHL
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgctttttatcggtggcttaccagtattttatatggaattagtccttggacaatttcat
cgttctggttgcataagtatttggaaaaagatttgtccaatgtttaaaggtattggttat
ggtatatgttttatatgtacatttattgcttgcttctataacgctgttattgcacatgcc
ctatattttttaatcaactcattacagtcagaagtaccttggaaaaactgtaataatcca
tggaatacaccattatgtgcaattaatctaaatggtttaaatggtaccattgtaaccaat
caaagcaataatttgagtggaaaattaagaacgccgtctgaggaattctttctatttaat
gtattggaagaaaatcattcccgcggtttcgatgatctcggcagtattaagccatcatta
gccttgtgtcttatcattgtttttattcttgtctattttgcgctctggaaaggaccacga
agtagcgggaaatacgtatggataacagctacagcaccatatgtaatcttatcagtactt
ttcgtacgtggaattacattacctggtgcatcaattggaatttattattatttgatgcca
aattttgaaatgctttttgatattgatgtttggacagctgcagctacacaaattttcttt
tcacttggtcctggatttggtgtattacttgcattaagtagttataatgattttcgaaat
aattgttatcgagatgcattggtgacatcatttatcaattgtggtacttcattttttgct
ggttttgtaatatttgcaactcttggctatatgtcaactataacaaatttaccagttaat
gaggtagtaggtgacaatgatgctaatattatatttatcgtctatccacaagcaattgct
acaatgtcatatgcaaattgttggtctttcatattctttgtcatgctaattactcttggt
attgatagtacgttcagtggaattgaagcattgataacgggattttgtgatgaatatccg
gatgtgttagcacgaaaacgtgaaatatttgtaggtatcgtaattgttgcctattatttt
ggtagtctaccaaccgttacttatggtggtaaatatgtcatatcattccttgatgaatat
ggtgtatcattatcagtattatttattgtaatgtgtgaaatggttgctgtttgttggttt
tatggaatacgacaatttagcaaagatattcaaacaatgcttggattttatccaggatta
tattggcgattttgttggacatgttgtcctatcattattactacaatattcttgttgacc
atttataaaacatcattggaaccgatgaccattggatcatatacatatccacaatggact
gtttatcttggatggtttctacgtttaacatcaattcttagcattccaatttttgccatt
tattatctatgtactactaaaggaacattgaaagaacgttggcaatcttcgatcaaacca
caacaaactgatcatttacggagatcatcattggtgcattcggtagtattacctgatgta
tcaatgattcgaattgataacaatgcatctgatatcagtgaaactacaatggctatcaat
aatactatccatttataa
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