Loa loa (eye worm): LOAG_17756
Help
Entry
LOAG_17756 CDS
T02664
Name
(RefSeq) tho complex subunit protein 2
KO
K12879
THO complex subunit 2
Organism
loa
Loa loa (eye worm)
Pathway
loa03013
Nucleocytoplasmic transport
loa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
loa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LOAG_17756
09122 Translation
03013 Nucleocytoplasmic transport
LOAG_17756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loa03019
]
LOAG_17756
03041 Spliceosome [BR:
loa03041
]
LOAG_17756
Messenger RNA biogenesis [BR:
loa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
LOAG_17756
Spliceosome [BR:
loa03041
]
Complex C
Other components
EJC/TREX
LOAG_17756
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
LOAG_17756
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
RRF_GI
Motif
Other DBs
NCBI-GeneID:
9944144
NCBI-ProteinID:
XP_020305910
UniProt:
A0A1S0UH60
LinkDB
All DBs
AA seq
1458 aa
AA seq
DB search
MNSTSEALTPQGELLRICRRVTEGQLAPDAACNIIRTHMKTIDNIPSLLVDVLAIVDLEL
STEKNEEFRKRFLEFISHLSDRIVADDVLKCELDILGANEQATRSRVVKTKTRLFFKQVK
FNLLREESEGYAKLITELLDNPSLTVSKALNRLYHLIGQFNLDPNRVIDIILECFESALQ
RRKFFVDLLIEFKASGDDICSILGFKFTFYQRSGSTPASLYRVAAALCDERVIDLLSLCT
FLSPKLEDLMNDHKSRVERDGKRAKKSETIYTGMVSVDSRISSATAAGYMDDNTTIAGVS
FASVLAVQNADDVKPVDEKDSDDAVLAKNQKLGLTFALLEGGAWQFAKQMLDRFPEFYAV
NASRSIALSIADLLERSTDDFYQEKSRFALGDTGTFNLGSSLAQTHSLEIVGSWSELVSV
VLPVLAYLGPHIAYRPKAAVKLVRLMALFFEEREKDPTWAQTTHTDNVCSALIDAIDETL
VPALSLANGNFAFSQELWKLLSHLPYTVRYRTYARWKTVHTMRHPQINICRGSTFGMTRY
VLKRLSKETVRMMGRQLGKLCHLHPAVVFDYILDQIQTFENLIEPVVESIRFLSDLEFDV
LSFCIIEHLAAPDKQQLKASDGSLSPWLQSLATFVGNVFLKYNIELTGVLQYVANQLKNN
KSFDLLVLREIIQNMSGIESMTGLTADQLEALAGGDTLRQEAGSFSTVRTNRRAILRLRD
ALFKEHLIVGLSILTAQQRQCIVYSESPDLPLKLAGQMLDQCQETLIQFGSFLRTNVRQE
EYCNRMPSVWELIGRFHLPVDAAFFISRPTFMHRVYSNFDKSRKSFRESDGSKMKLDSNR
KLALFRNAFDEMIGELESNLRSLLPDFIWADISSKIFTIFWVLSMYDISVPKTTYERELQ
RIRRSLALVTENAEISKTKRAKEEEQLRNVEKKLTDELKKQSDHVERILNILRHDKELLF
ADCSPKLRGTQMARFLQHCILPRAIFTDMDAAFCAHFIFLLHQQRTGFFQTVFFFDKLFN
DIGAILATLTENEANCLGRFLALVLETVQHWHGDKVIFDKECYRFPGFMTKLHMRNPEAT
NAESISDGMNYESYRTLCHKWQYRMTRSCLGILDGSNYVMMRNCLIVMIKMLAYFPLIEN
HIANIERTVNKVHEMEKGRRDDLSLMAASYAGHLRMRKTHTYTESQFHNRLTDITKKTTR
AGATRNANGTANVKAATKSSAMEISELSKQKNSAEGNTTELRRPTNGAAELRKLPVAVDE
KRKPSEPPPAELIAKKKLKVFDGEDRSQLQAQRGNEESQLRRSEIRKEGHREKEELKMEE
GEVGSPPSNSHSETLPSHKKTRGNKGVEDEAPRREKERTRTEEKRERKRESVTSTLTRGK
GKTPDDHLKTRERAWKRPAESADSDGNVKVARNEGSSGSDRSAESKGTKSSEMSPSTRTT
RHRRDAHRTTTASYDRSR
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaacgtcagaagcactcactccacagggggagctactccggatatgtcgacga
gttaccgagggacaactagctccagatgctgcctgtaacattattcgaacgcatatgaaa
acgattgacaacattcctagtttgctagtggatgttttggcaattgtggatctggaattg
agtaccgagaagaatgaagaatttcgaaaacgtttcttggaattcatatcacatttatct
gaccggattgttgctgatgatgtactgaaatgtgagttggatatattgggtgccaacgag
caggcgacacgatcacgagttgtgaaaacaaaaactaggctttttttcaagcaggtgaaa
ttcaacttactacgtgaggaaagcgaaggttatgcgaagttaataacggagcttcttgat
aatccttctctcactgtatcaaaagccttaaatcgactttatcacttaattggacagttt
aacttggatcctaaccgagtaattgatatcattcttgaatgttttgaatctgcactgcag
cgacgcaaattttttgtcgatttgttaatcgagttcaaagcgagtggtgatgatatatgc
agcattctaggattcaaatttactttttaccagcgttccggtagtactcctgcatcactt
tacagagtagcagcagctttatgcgatgaaagagttatcgatttgttgtcactgtgcaca
tttttatctccgaaactggaagatttgatgaacgatcataaaagtcgtgttgagcgagac
ggaaaacgagctaaaaaaagtgaaaccatctacacaggtatggtatcagtagactcacga
atttcttcggcgacggcggctggatatatggacgataatactaccattgcgggcgtatcg
tttgcttccgtattggccgtgcagaatgcagatgatgtaaaaccagtcgatgaaaaagac
agtgatgatgctgtacttgcaaaaaatcagaagcttggcttaacgtttgcattgctagaa
ggaggtgcttggcagtttgcaaaacaaatgctcgatagattccccgaattctatgctgtc
aatgcctcacgttctatagccctctctattgcggatctgttggaacggtccactgatgat
ttttaccaagaaaaatccagattcgctttgggtgataccggtacattcaatttgggttca
tcattggctcaaactcactctctcgagattgttggtagttggtcagagctggtctccgtt
gttcttcccgttttggcatatcttggtccacatattgcttatcgacccaaagcagctgta
aaactagtgcggttgatggcgttgttctttgaagaaagggagaaagatcctacatgggcg
cagactacccatactgacaatgtatgcagtgcactgattgatgccatcgatgaaacccta
gtaccagcattatccttagcaaatggcaattttgctttttcacaagagctgtggaagtta
ctcagtcatctaccatacacagtacggtatcggacatatgcacgatggaaaacagtgcat
accatgcgtcatcctcaaattaacatttgccgaggaagcacttttggcatgacgagatat
gtgctgaagcgtttatcgaaggaaacggtgcgcatgatgggccgtcagttaggaaagctg
tgccacctacatcctgcagttgttttcgattacattttagatcagattcaaacattcgaa
aatcttattgagccagtagtcgaatcgatacgtttcctcagtgatctggaatttgatgtg
ctctcattctgtatcattgaacatttagcagctccggataagcagcagcttaaggcatca
gatggatctctttctccgtggttgcaatcgcttgccacttttgttggaaatgtatttttg
aagtataacattgagttaacgggagttttgcagtatgtagcaaatcagttgaaaaacaac
aaaagcttcgatttactggttctgcgagaaattatacaaaatatgtccggcattgaatct
atgacaggattaacagcagatcaattggaagcacttgctggaggtgataccctgaggcag
gaggcaggctctttttcaacggttcgtacaaatagacgtgctatattacgccttcgtgat
gcactgttcaaagaacatttaatcgtaggtctatccatactgactgctcaacagcgtcag
tgcatagtatattccgaatcaccagacttacctctgaagcttgctggtcaaatgctcgat
cagtgtcaagaaaccttgattcaatttggttccttcctgcgtacaaatgtacgacaagaa
gaatattgcaatcggatgccctctgtttgggaactcatcggtcgctttcatcttcctgtg
gatgcagcgtttttcatctcgagaccaaccttcatgcatcgtgtctatagtaatttcgac
aaaagccgcaagtcatttcgcgaatcagatggaagcaaaatgaaattggattccaatcgc
aagttagccttgtttcggaatgcttttgatgaaatgattggcgagttagaatcaaacctt
cgatctcttttgcctgatttcatttgggctgacatttcatccaaaatatttacaatattc
tgggtactatctatgtacgatatttctgttccgaaaaccacttatgaacgagaattgcaa
cgtattcgcagatctttggctcttgttactgaaaatgctgaaattagtaaaacaaaaaga
gcaaaagaagaagagcagttgcgtaacgtggagaaaaaactaaccgatgagttgaagaaa
cagagtgatcatgtggaacgcattttaaatattttgaggcacgacaaggagttattattt
gctgattgtagcccaaagcttcgcggtacgcaaatggcacggtttctgcagcattgtatt
ttgccacgtgcgatctttaccgatatggatgctgcattttgcgctcactttattttttta
cttcatcagcaacgaactggcttcttccagactgtttttttctttgataagctgttcaac
gatattggtgctatactggctacgctaaccgagaatgaagcgaattgtttgggacgattt
ctagcacttgtacttgaaactgtgcagcattggcatggcgataaagtgattttcgataag
gaatgttatcgcttccctggcttcatgaccaaattgcacatgagaaatccagaagcaaca
aatgccgagagtattagtgatggaatgaattacgaatcatacagaactctgtgtcataaa
tggcagtacagaatgactcgatcatgtctcggaattttggatggttcaaactatgtaatg
atgagaaattgtttaattgtcatgattaagatgttggcatatttcccactaatcgaaaac
cacatcgcaaacattgaaaggaccgtgaacaaagtgcatgagatggagaagggtcgtaga
gatgacctatctttgatggccgcctcgtatgcaggtcatttacgaatgcgcaaaacacat
acatataccgaatcgcaattccataatcggctaactgatataacaaagaagacaacgcgt
gcaggtgcaacgagaaatgcaaatggaactgcgaatgtaaaagctgcaacaaaaagttca
gctatggaaattagtgagttaagcaaacagaaaaactccgcggaggggaatactactgaa
cttcgaaggccgaccaatggagcagcagagctgcgcaaacttccagttgcagttgatgaa
aaacggaaaccttcggagccacctcctgctgaactcatagcaaagaaaaaactaaaagtt
ttcgatggagaggatcgatcgcaactgcaagcccagaggggtaacgaggagtcgcaatta
cgtcgtagcgaaattagaaaggaaggacaccgggaaaaagaagagctaaaaatggaagag
ggtgaagtgggttcaccaccatcaaattctcactcggaaactcttccctctcacaaaaaa
acccgaggtaataaaggagtggaagacgaggcaccgaggagggagaaagagagaacgaga
acagaagaaaaaagggaacgtaagcgggagtctgttacatcgactttgacccgtggaaag
ggaaagactccggacgatcatttaaaaacgcgggagagagcatggaaacgacctgcggaa
tcggcggatagtgatggaaatgtaaaggtagcgcgaaacgagggtagcagtggctcggac
cgaagtgcagaatcgaagggcacgaaatcttccgaaatgtcgccgtccactcgtacaacg
cgacacagacgtgatgcacatcggacgacaacggcaagctatgatcgttcgagatag
DBGET
integrated database retrieval system