Loa loa (eye worm): LOAG_17788 Help Entry LOAG_17788        CDS       T02664                                  Name (RefSeq) CCR4-Not complex component   KO K12604   CCR4-NOT transcription complex subunit 1 Organism loa  Loa loa (eye worm) Pathway loa03018   RNA degradation Brite KEGG Orthology (KO) [BR:loa00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     LOAG_17788  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:loa03019]     LOAG_17788 Messenger RNA biogenesis [BR:loa03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      LOAG_17788   mRNA degradation factors    3'-5' decay     Ccr4-NOT complex      LOAG_17788 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Not1 CNOT1_CAF1_bind CNOT1_TTP_bind DUF3819 CNOT1_HEAT ARM_Cnot1 NOT1_connector DUF1778 Motif Other DBs NCBI-GeneID:  9942315 NCBI-ProteinID:  XP_020305860 UniProt:  A0A1S0UH08 LinkDB All DBs AA seq 2636 aa AA seqDB search MSISVTPTSIALASIDRLLVIAAEKFDSNNPDSLFDKDFLNHLFVAPFSTESGIVDQYVF RVLLDNIITSNTLLSDCLPASNPTNTAARSVSVSTVAFQKQQSLAIQQQPRSSSARKYNL QLKDNFCAYVIRQQLKNCIKDPTATSIRLFYRFVEVLEERLVEIRYSLLGRFLETLLVSL LSVDPSIQVLVGLILFSSSLVPQTTKGLGQYLRVVFRTLFEATRKDNSAVSDCALSTEFI HQLFTSLFSTQIIEFVAIDQQSVICFLKIFEKELAIRGITLIRTLPPLQLILTAAPEGNS KVSLSSAGSDHLSPFDYVDLEDKDLDEIMDSLAYQNPNLLAQQIQEIGTTFTLSVKSCRQ HLISLNSGDGTILNAVNLSRVIVMMINTCSGSNMQQSVQPSILWDHRSGSVPATGTSSSA ESLSTTTSGLSENSASVNSSQSMQQITWNAKNFANAIRELAPNLNWSEIIMHLDQTNFIV RTKAQLQLLTAILLEGLGSNPFPIGLLYREWNFHKYGQLSWIEQILQNPDVFCFSDYPHK AVNLTPLKVQPEETRELSNWRCLDLVDTLIRLGEVRKLVNGVMNILHKPTSTCPDVLLLA LLQMQACYFLPSSNLRIHLMQMLIPTLIGNHPNAVPVLNVVWNCEDKVQLRPTILTALCN YYMKSPDDQAKLSRILEVAHELKPDGLAELFNVPQFPFTIDLACLASRRDFLKLDKWVDD KLAVYGDAFASQIICYIRRRLPAGMVNSSVLPQETIRALLNALSRTTCMSSASVNDLSSL CCQIPGLKNSEGRLSAISTSRTQLSAAGAAHSSTSNVFSSGIGTPSVPVQQLTGSFGNFP FGTTGFGASNRDMLAAAQQMQNRQHQQGNLPGSVQIFGSGTGTNLCVPGSTTGPFPQAND LLKATNAANVLQPNFNGSHALSMSPSGQMMRTGFMSTGIPTTQTRSGPGAGGPGWSMPVG IPGTGGVRTTPGSTSGPSSALDFRVPPGAPGSAGNILNGNSSFVHNAAGQQQQQQQASGG SPGRITVPPAPMDDLTSVQFSEEIQNEANMYFQQIYSQHMQMPVADFVERLKQFKASNVQ RDKDILACVVKNLFEEYRFFHEYPERELRTTAEVYGSIIREGVISNLQFATAVRKVIESL QAEPGSMLWTFGIVALNACRTKLSLYPKVCVMIANQRNFQHFPQNLKDYVTSGIQGQQPH VPGRETPNWQPQQRTITDMNRALAARSGSSVLSVTSVDTLVNATEKEGSQIKQPSETVME KVAFLFNNLSQINLPKKVEEIKIMIEELDDNFIRWLAQYLVMKRVSIEQNFQPLYNLFLL AIENRKLEEFVKLETFRNIKILLRSDKRQAATNFGDRQLLKNLGLWLGAITIARDHPIVT SDLDMKSLLMEAYYKGQQELLFVVPFIAKILVSCSKSQIFGPNCAWIKAIFKILAELHNQ PDLKLNLKFEIEVLCKELGVDLSKLTIEDVLKDTERLIRLPQQLGDLKMLKPPELQMAAS PVPAVRVNSEASAEVVAGIPQTATADVDHLIGNLSSITMPRSQSPSGTQVQTPAHFHYHD INIVSFDGLTPHLKLSASLPLFQLNPQLKHVVRPAISHAIKELIGPVTERAIRIAMHVTE HICKKDFALEPDEQKMRRASQHMIRAMTAGMASITCREPLSSTILGFLKTAFTNSLRCNI TPEQQKLIDEAATTIAEDNVELATNFIVKTACEKATPEMDKRLESEFTTRKQYRVEGRQY ADPVALARAQQMPEKIRLRVGSVTNHQMVVYDEFSSRICGFKPTTAEDMIVDFSIMKSST PTTMQPVIQQPGMDKEVEQFVTALQMLVHDIDSILSAYGVPNYRASAAIANIRDAVSQLA SNPREPIQMHNCIQRIVEQVLCAYRNAEFQQHQLPPPEVDWNRRLKDIFLQLCRILLTQI PLGDLARRMTRVIVDCRLDYRFNVDAMDLLAKHMLIQMNVYDQNLALLIDSGSNFEALIF AQRFLKLLTMSNPTHSRQAVSESMPLTMEQLAKAQQFGQNRPTPESFATAAVPLGNEVGL IGSRGVTSLPPPSTITDRVHNSLPAALAASAPPSGPIGSGTHLRSDNNVDDGAELQSKVE MILREWIQLCYTPQAQKEPQQALAQIVHVMHEQGVISTDEMITRFFRLCTEMCVDVSYRL IKNDVSGHPTTVVRQRCYYTLDAFVKLTCLMIKHSDGSQYQTKINLLKKVLNIITNVLHL DHEVRGTDFHAMPYQRILIIMFNELTAPDPALDVISWHILEAFGQALFILQPRRVPGFAY AWLDIIGHRNFIGRLLKESAEPMKTAAMYTQLIICHLKFLAPFLRNIQLPKSIAMMYKGT LRVLLVILHDFPELLCEYHIVICDTIPPNCVQLRNLVLSAYPKNMRLPDPFGSNLKVDSL LEMTQEPKMNINMAAIIPPDLRTQLDDYLNTRSSVDFHANLPSLLQVSNIAGSKYNTTVM NAVVIYVGMRAIQAIHEKQQCITMTTIAHTAYMDIFQNLAVSLCTEGRYLLFNAIANQLR YPNSHTHYFSCTLLYLFLEANTEVIQEQITRILFERLVALRPHPWGLLITFIELIKNPSY SFWKHEFVRCAPEIERLFQSVANSCMGSNARHINANAPHASQLPAGSSPQAIQNVQ NT seq 7911 nt NT seq  +upstreamnt  +downstreamnt atgtctataagtgtgacgccaacttcgatagctctcgcctcaattgatcgtttattggtt attgcggcagaaaaatttgattctaataacccggattctttgtttgataaggatttctta aatcacttatttgtggcacctttttctactgagagtggcattgttgatcaatacgttttt cgcgtattgcttgataatatcataacatcgaacacattactttctgattgtctacctgct tcaaatccaacaaacacagctgctcgatctgtatctgttagtactgttgcatttcaaaag cagcagtcacttgccattcaacaacaaccacggtcctcatcagctcgaaagtacaaccta caactaaaagacaatttctgcgcgtacgtaattcgacagcagctgaagaactgtatcaaa gatccaacagcaacttctatacggcttttttatcgctttgttgaagtattggaggaaaga ttagtggaaatacggtatagtctacttggacgttttcttgaaactcttcttgtttcacta ctatccgttgatccttctattcaagtgcttgttggccttattctcttctcttcttcactt gtgccgcaaactaccaaaggacttggccagtatcttcgtgtcgtctttagaacattattt gaagctaccagaaaagataattcagcggtctctgattgtgcattatctactgaattcatt catcagctttttacgtcccttttctcaacgcagattattgaatttgttgcgattgatcaa caatctgttatctgttttctgaaaatttttgaaaaagagcttgctatacgtgggattact ttaataaggactctcccgccactccaacttattttgacagctgcgcctgaaggaaattcc aaagtatcattatcatcagcaggaagtgatcatctttcaccctttgattacgttgatttg gaagataaggatctcgatgagataatggatagcttggcttatcagaatccgaatttactg gcacagcagatccaggaaattggtacgacatttacgttaagtgtgaagtcatgtcggcag cacctgatctcgctgaattccggagatggaactattttgaatgctgttaatctttctcga gttattgtgatgatgataaatacatgttccggctctaatatgcagcagtcggtccaacca agtattttatgggaccatcgttccggaagtgttccagcaactgggactagttcatcggca gaaagtttgtcgactacgaccagcggtctctccgaaaattctgcgagcgtaaactcatca cagtcgatgcaacagattacttggaatgccaaaaattttgccaacgccattcgagagctg gcaccaaacctaaattggtcggaaataataatgcaccttgatcaaacaaattttattgtg cgaacaaaagcgcagttgcagttattaactgcaattttgttagaaggtcttggttctaat cctttcccgataggcttgttgtatcgtgaatggaatttccacaaatacggccagttatca tggattgagcaaatattgcaaaatcccgatgtattttgcttttctgactatcctcacaaa gcagtgaatttgactccgttgaaagtacagccggaagaaacaagggagttaagtaactgg cgctgtttggatttggtggatacgttgatacgactaggtgaagtgagaaaattggtgaat ggtgtgatgaatattttgcataaaccaactagtacttgcccggatgttttgttgctagct ttattacaaatgcaggcatgttattttttgccttcgtcaaatttgcgcattcacctaatg cagatgctcataccaacgttgatcggaaatcatccgaatgctgttccggtactaaatgta gtttggaactgcgaagacaaagtgcaattacgaccaacgattttaactgctctttgcaat tattatatgaaaagtccagatgaccaagcaaaattgtcccgaatcttggaagtagcccat gagcttaaaccagatggcttagccgaactattcaatgtaccacaatttccctttacaatt gatttagcttgtttggcttcgagaagagatttcctgaagttggacaagtgggttgatgat aaattagcagtatatggggatgcgtttgcttcacagattatatgttatatacgtcgccgg ttaccagcgggcatggtgaacagtagtgtgttaccgcaagagacaataagagcgctattg aatgctctttcacggacgacttgtatgtctagtgcatcagtcaatgatttatcctcgctt tgctgtcagatacccgggctgaaaaacagtgaagggcgtttgtcagccatatcaacctct cgaacgcaattaagcgcagctggagctgcacactcatcaacgtcgaatgtgtttagtagt ggtataggaacaccatcggtgccggtgcaacagctcaccggcagttttggtaattttccg ttcgggacaactggatttggtgcatcgaatagagatatgcttgcagctgcacaacagatg caaaatcgacagcatcaacaagggaatttacctggatcagtgcaaatttttggaagcggt acaggaacaaatctttgcgttccaggctcgactacaggaccatttccgcaagcaaatgat ttacttaaagcgacgaatgcagctaatgttttgcagccgaattttaatggaagtcatgct ctgtcaatgtcaccgtccgggcagatgatgaggacaggttttatgagtactggaatacca acaacacaaacgcggtcaggacctggagctggaggacctggttggagtatgccagttggt ataccaggaactggtggtgtacgaacaacaccgggatccactagtggtccttcttctgct cttgattttcgcgtgccacctggtgctcctggttcagcaggaaatatattgaatggaaac agttcatttgtgcataacgcagctggacagcagcagcaacaacagcaagccagtggcggc tcgccaggtcgtattactgtacctccggcacctatggacgatcttacttccgtacagttc agtgaggaaattcaaaatgaagcaaatatgtactttcagcaaatatactctcagcatatg cagatgccggtcgcagattttgttgaacgcttgaaacagtttaaagcatcaaatgtgcaa agggacaaggatattttggcatgtgtggtcaagaatttattcgaagaatatcgatttttt catgagtatcctgaacgagagttaagaacaactgcagaagtatatggtagcattattcgt gagggtgtgatatcgaacttgcagtttgctaccgcagtgaggaaggtaatagaatcattg caagcagaaccgggtagtatgctttggacatttggaatcgtagcgcttaatgcatgtcgg acaaagctgagtttatatcccaaagtatgtgtcatgattgctaaccaacgaaatttccag catttccctcagaatttgaaggattacgtaaccagtggtatacagggacaacagccacat gttcctggtcgtgaaacaccaaattggcagccgcaacaacgaacaataactgatatgaat cgagctttagcagcacgttccggttcatcagtgttgtctgttactagtgttgacacactg gttaatgcaactgaaaaagaaggtagtcagataaagcaaccatcagaaactgtaatggaa aaagttgcatttttgttcaataatttaagccaaatcaatcttccgaaaaaggtcgaagaa ataaaaattatgatcgaagaactggatgataactttattcgatggttagcacaatatctg gtgatgaaacgtgttagtattgaacagaattttcaacctctctacaatctctttcttttg gcaatcgaaaacagaaagttggaagaattcgtgaagttggaaacttttaggaacataaag attctcttgagaagcgataaacgacaagcagcgacgaattttggcgataggcagttgcta aaaaatctcggcttatggctgggtgcgattacaatcgcccgcgaccatcctatcgttaca tcggatttggatatgaagtcccttcttatggaggcttattacaaaggacagcaagaactt ctgtttgttgtacccttcatcgcgaaaattcttgtctcttgtagtaaaagtcagatcttt ggaccaaattgtgcgtggataaaagcgattttcaaaattttggcagagcttcataatcaa ccagacttaaaattaaatttgaagttcgaaatagaagtactctgtaaggaattaggcgtt gacctaagcaagctcacaatagaagatgtgctgaaagatactgaacgcttgataaggctt ccgcaacaattaggcgatctaaagatgttaaaaccacccgagctacagatggcggcttca cctgtcccagcagtgcgtgtcaattctgaagcttctgcagaagttgtggcaggtatacca caaacagcaactgctgatgttgatcatttgattggcaatttatcaagcatcactatgccg agaagtcagtctccaagtggtacacaagtgcagacaccagctcattttcactatcatgat ataaacattgtttccttcgatggtcttacaccgcatttgaagctgtcagcttcattacct ttgtttcaattgaatcctcagttgaaacacgtcgttcggccagcaattagtcatgcgatt aaagaattgattggaccagttactgagcgagcaattcggattgctatgcatgttacagaa catatctgcaagaaggattttgcactagaaccggacgagcaaaaaatgcgtcgtgcctca caacatatgattcgagcgatgacagcgggaatggcatccataacatgcagggagccacta tcttcaactatcctaggatttcttaaaacggcattcacaaattctttgcgatgcaatatt acacctgaacagcaaaaactaatcgacgaagctgcaacaactattgcggaagacaacgtg gaattggcaacaaattttatagtcaagacagcatgtgaaaaagcaactcccgaaatggat aaacgccttgaatctgaattcactaccagaaagcaatatcgtgttgaaggtcgacagtac gctgatcctgttgcccttgcacgcgctcagcagatgccagagaaaatacgacttcgtgtt ggatcggttacaaatcatcagatggttgtttatgatgaattttccagccggatttgtggt ttcaagccaacaacagccgaagatatgatagtcgatttcagtatcatgaaatcgtctact ccaactaccatgcagccagtgattcaacagcctggaatggacaaagaagtggagcaattt gtgacagctttacaaatgcttgtgcacgatattgattcgatattatccgcttacggtgta ccaaattatcgagcaagtgctgcaattgctaatattcgtgacgcagtatcacagttggca tcaaatccacgtgaaccaattcaaatgcataactgtatacaacgcattgttgaacaagtc ttgtgtgcatatagaaatgcagaatttcagcagcatcaactgccgcctccggaagtggac tggaatcgcagattaaaggacatcttccttcaactttgtcgtatcctactaacacaaatt cccttgggtgacttagctcgtcgtatgactcgagtgatcgtggattgccggttagattat cgattcaacgttgatgctatggatctgcttgcgaaacacatgcttatccaaatgaatgtt tatgatcagaatttggcgttgttgatcgatagcggcagcaattttgaagctttaatattt gctcaacgatttttaaaactgttgacaatgagtaatccaacacattcgcgacaagcagtt tccgaatcaatgcctctcacgatggaacaattggctaaggcacagcaattcggacaaaac aggccaactcctgaaagctttgcaacggcagcagtaccactaggtaacgaagtgggactt attggttcacgaggtgttacatcacttccaccaccttcaaccatcactgatcgtgtgcat aacagtttaccagcagcacttgctgcatctgcgccaccgtctggtccaattggaagcggt acgcatctaaggagcgataataatgtggacgatggtgccgagttgcagagcaaggtagaa atgatattacgagaatggatacagctttgttacacaccgcaagcacagaaagagcctcaa caagctcttgcgcaaattgttcatgtgatgcatgagcaaggtgttatatcaacagatgag atgatcacacgtttctttcgtttgtgtactgaaatgtgcgttgacgtgtcatatagacta ataaagaacgatgtaagcggccatccgacgaccgttgtacgacagcgatgctattataca cttgatgctttcgtcaaactcacatgtttgatgatcaaacacagcgatggtagtcaatat caaacgaaaatcaatttgttgaagaaagtattgaatatcatcaccaacgtattgcatttg gatcacgaggtccgcggtactgattttcacgcaatgccatatcagcgtatcctaatcatc atgttcaatgaacttaccgctcccgaccctgctttggatgtcatttcatggcatatatta gaggctttcggacaggctttatttatcctacagccacgacgagttccgggttttgcttat gcttggctagatatcattggacatagaaattttattgggcggctattgaaagaaagcgcc gaaccaatgaaaacagctgccatgtacactcagttgattatatgccatttgaagtttttg gctccattcttgcgtaatattcaacttccaaaatcaattgccatgatgtataagggtact cttcgcgttttattggtgattctgcatgatttcccagaattgctttgcgagtatcacatt gttatctgtgatactataccaccgaactgtgttcagttacgcaaccttgtacttagtgct tacccaaaaaacatgcggctacctgatccgtttggctcaaatttgaaggttgatagcttg ctagaaatgactcaagaaccaaaaatgaatatcaatatggctgcaatcattcctcctgat ctaagaacgcaactggatgattatttaaatactcgctcatctgttgattttcatgctaat ttgccaagtttgttgcaggttagtaacattgctggttcgaagtacaatacaaccgtcatg aatgcagttgttatatatgttggaatgcgtgcaattcaagcaatccatgagaaacaacaa tgcattacaatgactacaatcgcacacacagcatatatggatatttttcagaatctagca gtgagcttgtgtactgaaggacggtatttactgttcaacgctatagcaaatcagctgcgt tatccgaacagccacacgcattatttcagctgcaccctattatatctatttttagaagca aatactgaagtaatacaggaacaaattacgcgaattctattcgagcgcctggttgcttta cgcccacatccgtggggtttgctgatcacattcattgagttgatcaaaaatccaagctac agtttttggaagcatgaatttgtgcgatgtgctccagagattgaaaggcttttccaaagt gtggcaaattcttgcatgggctcaaatgcacgccacataaatgcaaatgcaccacatgca tcgcaattaccagcaggcagcagcccgcaagctatacagaatgttcagtga

DBGET integrated database retrieval system