Loa loa (eye worm): LOAG_17789
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Entry
LOAG_17789 CDS
T02664
Name
(RefSeq) WW domain-containing protein
KO
K12821
pre-mRNA-processing factor 40
Organism
loa
Loa loa (eye worm)
Pathway
loa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
loa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LOAG_17789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
loa03041
]
LOAG_17789
Spliceosome [BR:
loa03041
]
Complex A
U1 snRNP components
U1 related factors
LOAG_17789
Complex B
LOAG_17789
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
FF_PRPF40A
WW
WW_TCERG1
Cas3_HD
FF_RHG35_4th
Motif
Other DBs
NCBI-GeneID:
9938393
NCBI-ProteinID:
XP_020305861
UniProt:
A0A1S0UHN4
LinkDB
All DBs
AA seq
776 aa
AA seq
DB search
MLPFGGPPTFPPLMNIPPNAAAAASQATYLQQQVIMPPLQRIPMMAVSSAPAPLQLPQVS
VASPATTPRPMLVPPQMQIEIATAAHSPRTSSIGTTLITSDIWSEHTASDGRVYYYNKIT
KQSSWQKPDELKTPEEKKLAAAKLWREYKTPEGRPYYYNIETKETTWICPKDFDPAVVTK
VKNGAESKGSDTLKTEPQSGGESELEKAVLATLKSLEQPNEQTENTKEADAEDAEEEKDL
KQKQSDKFRDLLRDKYNEGKISSTSSWEQAMRYIQHDPRFRILNKVSEKKQLFNAWKVQR
QKEERDEKRLAIKKAKEDLEEWLQNNPKVRPTMRYSKAEVLFADEPIWKAVHEGERKEIF
ADALEFIDKREKENAKAVRRRNVQALADILEGMEEITYRTTWAQAQRLLIENPSFANDST
LQNMDKEDALIVFEEHIRTAEKHYLKEKDMEERRRRRQERKIREAFQAYLVELHKRGELT
SISLWSELYPVISADSRFDNMLKQSGSTPLDLFKFYVEDLKSQFGQDRRVIKEILKDLNV
TVEVGTTFDQLCKWVSSDERGKTVDPGNMKLCYNSLVEKAEAKEKEQEREEARKRRRHET
AFRNILRTLVPPVEPNSQWEVIRPKIENEEAFITVETEQLREKFFNDYLQNLAEACGHHH
GSSKKKKKDKKKRRKEEKESETEGEAKPKKKRKHHKSDVSDEERGTERKRKKKKKRLLSK
SCSRSQSVEPVEKQSKEEEESPLQQDGSNESELSEGELERKRKILLNKLDVSPQSS
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgctaccgttcggtggacctccaacattccctcctttgatgaatataccaccaaacgct
gctgctgcagcatcacaagcaacttacttgcagcagcaagttatcatgccaccactgcaa
agaataccgatgatggccgtgagttcagcaccagcgccgctacaacttccccaagtatcg
gtggcttcacctgctactacacctcgaccaatgcttgttccaccccagatgcagattgaa
atagctactgcagcgcattctcctcgcacttcctccattggtactaccctgatcaccagt
gatatttggtctgagcatacagcatctgatggacgtgtatattactataacaaaataaca
aagcaatcttcatggcaaaaaccggatgagttgaaaactccagaggagaaaaaattggct
gctgcaaaactttggcgtgagtacaaaacacctgaaggacgaccttattattataatatc
gaaactaaagagactacttggatttgtcctaaagatttcgatcccgcagttgtaacaaag
gtaaaaaatggtgcggaatcgaaaggaagtgacacattaaaaacagaaccacaaagtggt
ggagaatctgaattggagaaagcagtgttggccacactgaaatcgcttgagcaacctaat
gaacaaacagaaaatacgaaagaagcagatgcagaagatgcagaagaagagaaagatttg
aaacagaagcaaagtgataaattccgagatctgctgcgagataagtataatgaggggaag
atatcatctactagttcatgggaacaagcaatgagatacattcaacatgatcctagattt
cgaattttaaataaagtgagcgagaaaaagcagctattcaatgcatggaaagtgcagaga
caaaaggaagagagagatgagaaacgtcttgctatcaaaaaagcgaaggaagatttggaa
gaatggttgcagaataatccaaaagtacgaccaactatgcgttactccaaagcagaagta
ctttttgctgacgaacctatctggaaggctgtccatgaaggtgaacggaaagagattttt
gcagatgcattggagttcatagacaaacgtgaaaaagaaaatgcgaaagctgtccgccgt
agaaatgttcaggctttagccgacattctggaagggatggaggaaataacttatcgaaca
acgtgggcgcaagcccaacgtcttcttattgagaatccttcatttgccaatgacagcaca
ttacaaaatatggacaaagaagatgcgctcattgttttcgaagagcatatacgtacggca
gaaaagcattatttaaaagaaaaggatatggaggagcgtcgaagacgccgacaagaaaga
aaaatacgtgaagcttttcaagcttatttagtggaactgcataaacgaggtgaattgact
tcaatatcgttatggagtgaactgtatcctgtcatttctgcagactcacgtttcgataat
atgttgaaacaatcgggtagcacaccgctagatttgttcaagttttatgtagaagattta
aaaagtcagtttggtcaagatcgacgagtgataaaagaaattctaaaggacttgaatgtg
acagtcgaagtgggcacaacttttgatcaactttgcaagtgggtatcatctgatgaaaga
ggcaaaaccgttgatccgggtaacatgaaactttgttataactccttggtagagaaagca
gaagctaaagaaaaagaacaggagcgtgaagaagcaagaaagagaaggcgacatgaaaca
gcatttcgaaatattctgcgaactttggtccctccggttgaaccaaactcgcagtgggaa
gttatacgtccaaaaattgaaaacgaagaagcgttcattacagttgaaactgaacagctt
cgagagaaattcttcaatgattacctccagaatctagcagaagcttgtggtcatcatcat
ggttcatcaaagaagaaaaaaaaggataagaagaagcgtcgaaaggaagaaaaagaaagc
gaaacagaaggcgaagcaaaaccaaagaaaaaaaggaaacaccacaaatcggatgtaagc
gatgaagaaagaggaacagaacgaaagcgtaaaaagaagaaaaaacggctactctcaaaa
tcttgctcaaggtcgcaatctgtagaacctgttgaaaaacaatccaaagaagaagaagag
tctccactgcagcaagatggaagtaatgaatcggaattaagtgaaggcgagttggagcgg
aaaaggaaaattttactaaataaactggatgtatctcctcagtcatcctaa
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