KEGG   Loa loa (eye worm): LOAG_18127
Entry
LOAG_18127        CDS       T02664                                 
Name
(RefSeq) Clp1
  KO
K14399  polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
Organism
loa  Loa loa (eye worm)
Pathway
loa03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:loa00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    LOAG_18127
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:loa03019]
    LOAG_18127
Enzymes [BR:loa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     LOAG_18127
Messenger RNA biogenesis [BR:loa03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor IIm (CFIIm)
     LOAG_18127
SSDB
Motif
Pfam: CLP1_P Clp1 CLP1_N TniB nSTAND3 AAA_24 CbiA SRP54 MMR_HSR1 ATP_bind_1 AAA_22 AAA_16 AAA AAA_18
Other DBs
NCBI-GeneID: 9949191
NCBI-ProteinID: XP_020305483
UniProt: A0A1I7VSJ3
LinkDB
AA seq 433 aa
MESAKSPPEQIVQEFTLKEDNELRFEVANGDVMLELVDGRAEVFGTELIQHKKYIFPAGS
RVAVFTWMKAVVELVGKTESAYVAEQTPMIIYLNTHAALEQLREHAESVVMQQEQARGPS
LMIVGPTDVGKTTVCRILCNYAVRVGRTPIFVDLDVGQGSISVPGTVGALYIEKTADIVE
GFDKKAPLVYHFGNLSPGSNIPLYDLLVKQLAEAVSKRRKSSQDATYGGVIINTCGWVKG
EGYACLVNAAEEFEVDVVIVLDHERLYNELQRDLPSFVKILHQPKSGGVENRSKEVRMSS
RNAAVHKYFYGTRAMPLYPHTFEISFDEVQFCKIGCERLPIECLPFGMKVDDHRTKVVPV
EPSEDLVHHLVSLSMCATVDQSVLTTNVMGFIVITAVDMEREKLTVLSPQPYPLPSKVLI
FSEVTFIDDKERT
NT seq 1302 nt   +upstreamnt  +downstreamnt
atggagtcagcgaaatcgcctccggagcaaattgtccaagaatttactttaaaagaggat
aacgaactgcgttttgaggtcgcaaatggtgatgtgatgttagaacttgtggatggacgt
gcggaagtttttggaactgagcttattcagcacaaaaaatacatctttccagctggatca
agagtagctgtgtttacgtggatgaaggctgtcgtggaacttgttgggaaaacagaaagt
gcgtatgttgccgaacagactccaatgatcatttatttgaatacacatgcagctttggaa
caactacgtgagcatgctgaatcagtagttatgcaacaagaacaagctcgtggaccatcc
ttaatgatagttggtccaacagatgtgggtaaaacaacggtctgtcgtattctttgtaat
tatgcagttcgggtgggtcgaacaccaatatttgttgatttggatgttggacagggaagt
atttctgtccctggaactgttggagcactctatatcgagaaaacagccgatattgttgaa
ggtttcgacaagaaagcacccttagtatatcattttgggaatctttcacccggttccaac
attccactctacgatttattggtaaagcaacttgcggaagcagtatcgaaaagacgaaaa
tctagccaagatgctacttatggcggggtaataatcaatacatgtggttgggtcaaagga
gaagggtatgcatgtttagtaaatgcagcagaagagtttgaagttgacgttgttattgta
ttagaccatgagcggttatataatgagctgcaacgagatttaccatcttttgttaagatt
ttgcatcagccgaagtccggtggagttgaaaatcgttcaaaagaagttagaatgtcgagt
cgcaatgctgctgtacataagtatttctatggtacacgcgcaatgccgctttatcctcat
acattcgagatatcatttgatgaagttcagttttgcaaaattggctgcgaacgattgcct
atagaatgtttaccatttggaatgaaagttgatgatcacagaacaaaagtagtaccagtg
gaaccatcagaagatttggtacatcatcttgtatcgctttcgatgtgtgcgactgtggat
cagtcagtactaacaacgaacgtgatgggttttattgtgattacggcagtggatatggaa
cgggaaaagctaacagtactgagtccacaaccatatccactaccatccaaggttctcatt
tttagcgaagtaacatttattgatgataaggagcggacttaa

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