Loa loa (eye worm): LOAG_18127
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Entry
LOAG_18127 CDS
T02664
Name
(RefSeq) Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
loa
Loa loa (eye worm)
Pathway
loa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
loa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
LOAG_18127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loa03019
]
LOAG_18127
Enzymes [BR:
loa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
LOAG_18127
Messenger RNA biogenesis [BR:
loa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
LOAG_18127
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
TniB
nSTAND3
AAA_24
CbiA
SRP54
MMR_HSR1
ATP_bind_1
AAA_22
AAA_16
AAA
AAA_18
Motif
Other DBs
NCBI-GeneID:
9949191
NCBI-ProteinID:
XP_020305483
UniProt:
A0A1I7VSJ3
LinkDB
All DBs
AA seq
433 aa
AA seq
DB search
MESAKSPPEQIVQEFTLKEDNELRFEVANGDVMLELVDGRAEVFGTELIQHKKYIFPAGS
RVAVFTWMKAVVELVGKTESAYVAEQTPMIIYLNTHAALEQLREHAESVVMQQEQARGPS
LMIVGPTDVGKTTVCRILCNYAVRVGRTPIFVDLDVGQGSISVPGTVGALYIEKTADIVE
GFDKKAPLVYHFGNLSPGSNIPLYDLLVKQLAEAVSKRRKSSQDATYGGVIINTCGWVKG
EGYACLVNAAEEFEVDVVIVLDHERLYNELQRDLPSFVKILHQPKSGGVENRSKEVRMSS
RNAAVHKYFYGTRAMPLYPHTFEISFDEVQFCKIGCERLPIECLPFGMKVDDHRTKVVPV
EPSEDLVHHLVSLSMCATVDQSVLTTNVMGFIVITAVDMEREKLTVLSPQPYPLPSKVLI
FSEVTFIDDKERT
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagcgaaatcgcctccggagcaaattgtccaagaatttactttaaaagaggat
aacgaactgcgttttgaggtcgcaaatggtgatgtgatgttagaacttgtggatggacgt
gcggaagtttttggaactgagcttattcagcacaaaaaatacatctttccagctggatca
agagtagctgtgtttacgtggatgaaggctgtcgtggaacttgttgggaaaacagaaagt
gcgtatgttgccgaacagactccaatgatcatttatttgaatacacatgcagctttggaa
caactacgtgagcatgctgaatcagtagttatgcaacaagaacaagctcgtggaccatcc
ttaatgatagttggtccaacagatgtgggtaaaacaacggtctgtcgtattctttgtaat
tatgcagttcgggtgggtcgaacaccaatatttgttgatttggatgttggacagggaagt
atttctgtccctggaactgttggagcactctatatcgagaaaacagccgatattgttgaa
ggtttcgacaagaaagcacccttagtatatcattttgggaatctttcacccggttccaac
attccactctacgatttattggtaaagcaacttgcggaagcagtatcgaaaagacgaaaa
tctagccaagatgctacttatggcggggtaataatcaatacatgtggttgggtcaaagga
gaagggtatgcatgtttagtaaatgcagcagaagagtttgaagttgacgttgttattgta
ttagaccatgagcggttatataatgagctgcaacgagatttaccatcttttgttaagatt
ttgcatcagccgaagtccggtggagttgaaaatcgttcaaaagaagttagaatgtcgagt
cgcaatgctgctgtacataagtatttctatggtacacgcgcaatgccgctttatcctcat
acattcgagatatcatttgatgaagttcagttttgcaaaattggctgcgaacgattgcct
atagaatgtttaccatttggaatgaaagttgatgatcacagaacaaaagtagtaccagtg
gaaccatcagaagatttggtacatcatcttgtatcgctttcgatgtgtgcgactgtggat
cagtcagtactaacaacgaacgtgatgggttttattgtgattacggcagtggatatggaa
cgggaaaagctaacagtactgagtccacaaccatatccactaccatccaaggttctcatt
tttagcgaagtaacatttattgatgataaggagcggacttaa
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integrated database retrieval system