Loa loa (eye worm): LOAG_18703
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Entry
LOAG_18703 CDS
T02664
Name
(RefSeq) CPSF A subunit region family protein
KO
K10610
DNA damage-binding protein 1
Organism
loa
Loa loa (eye worm)
Pathway
loa03420
Nucleotide excision repair
loa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
loa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
LOAG_18703
09124 Replication and repair
03420 Nucleotide excision repair
LOAG_18703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
loa04121
]
LOAG_18703
03400 DNA repair and recombination proteins [BR:
loa03400
]
LOAG_18703
Ubiquitin system [BR:
loa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
LOAG_18703
DNA repair and recombination proteins [BR:
loa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
LOAG_18703
TCR (transcription coupled repair) factors
Cul4-CSA complex
LOAG_18703
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Motif
Other DBs
NCBI-GeneID:
9942754
NCBI-ProteinID:
XP_020304856
UniProt:
A0A1I7VFU1
LinkDB
All DBs
AA seq
1145 aa
AA seq
DB search
MALNYIVTAYKPTVVTHALVGSFIVPTELNLVLAKTNRVELFLVTPEGLKPHRECPVFGR
IATIKLFRAPGEDVDSLLILTAKYHLAIIRWTPTSELRTRASGHIVDRVGRPSETGMIAT
VHSSGLMVFRLYDGLLKVVQWNEGKDLRGFNVRCDDLYIIDITFMSDPDRPTLAYIYQDD
NGRHIKVVTLNIEDKELSSPLWKHDNLEGEASMVIGVPEPAGGCLIAGPDAISYHKGGDD
ALRYAGVPGSRLHNTHPNCYAPVDRDGQRYLLADLAGNLYMLLLEFGKGQEQDESSTVSV
KDMKVESLGNTCIAECMCYLDNGVCFIGSRFGDSQLIRLSTEPRADGTGYISLLDSYTNL
APIRDMTVMRCNGQQQILTCSGAYKDGTIRIIRNGIGIEELASVELKGIKNMFTLRTRDH
EFDDYLILSFDSDTHVLLINGEELEDTQITGFVVDGATLWAGCLFQSTTILQVTHGEVIL
IDGDNIQIWKASKWITLVAVNEITGQLVIACGALLIYLEADSAGFKLISELECEFEISCI
DITPIGNETLRSEICAVGYWTDLSVALRTLPQLMEVVREKIPGDMLSRSIMLSPMEGHVY
LLVALGDGTVHYFQIDMKTGALLDPKKATLGTQPIHLRKFRSRCSSVHNIFVCSDRPAVI
YSSNQKLLFSNVNLRMVSTMTPLYAEAYPDALVLTDGNSLVIGRIDDIQKLHIRTVPLGE
SPSRIAYQPETNTIAVTVERLEFVDAMGKHHFGQCASKNAMETSSSRLSSMRREPTPECL
AEEMEVSSILLLDSNTFEILHSHELEGSEMAMSLASCQLGNDSQPYFVVGTAVIMSDETE
SKMGRIMMFQASEGPERMRLVYEKEIKGAAYSIQSMDGKLVVAVNSCVRLFEWTADKELR
LECSDFDNVTALYLKTKNDLILVGDLMRSLSLLSYKSVESTFEKVARDFMTNWMSACEII
DSDSFLGAENSYNLFTVVKDSFTVFKEEGTRLQELGLFYLGEMVNVFCHGSLTATQVDVA
PLYHSSILYGTSDGGIGVIVQMPPVLYTFLHDVQKRLADYTENCMRISHTQYRTFETEKR
SEVPNGFIDGDLIESLLDMGKDSVGQIVNGLKMPLLNIPSSETTELVDATAEDVLKLVED
LSRIH
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atggccctcaactacattgtaacagcttacaaaccaacagtggtaacccatgctttggtt
ggtagtttcattgttcctacggaactaaatttagtgctagcgaaaactaatcgcgtggaa
ctgtttttggtcacacctgaaggactgaaaccacacagagaatgtccagtgttcggacgc
atcgcaacaataaaactgtttagggcgccgggtgaggatgtggatagtttgctgatcctg
acagcaaagtaccacttggctataatccgttggacaccaacgagcgagttacgtacacga
gcttcgggacacattgtggatcgagttggacgaccatccgaaacaggaatgatagcaact
gttcattcatcagggttgatggtatttcgtttatacgatggccttttgaaagtagtgcaa
tggaatgaaggaaaagacctacgtggtttcaacgttagatgtgatgatttatacatcatt
gatataacatttatgtcagatcctgaccgcccaacacttgcctacatataccaggacgat
aatggacgccatataaaggtagttactcttaatattgaagataaagagctcagctcacct
ctttggaaacacgataatctcgaaggtgaagcgagtatggtgattggtgttccagaacct
gcaggtggatgtctcattgcaggtccagacgctatttcctatcataaaggtggcgatgat
gccttgcgttatgcaggagtacctggatcaagacttcacaatactcatccgaattgttat
gctccagtagatcgtgatggacagcggtatttattggctgatttagctggcaatttgtat
atgttattgttggaattcggcaaaggtcaggaacaagatgagagctcaactgtgagtgtg
aaggatatgaaggtcgaaagcttagggaacacttgtatagcagagtgcatgtgttatttg
gataatggggtatgtttcattggttcacgttttggtgacagtcagctgatacgtctcagt
acagaaccgcgagctgatggcaccggctacatatccttattagacagttacacgaatctg
gcaccaataagagatatgacagtaatgcggtgtaatggacaacaacaaatcttaacatgt
tctggagcttacaaagatggtactattcgtattattaggaatggaattgggatcgaagaa
ttggcctctgtagagctaaagggcatcaaaaacatgtttacccttcgtacacgtgaccat
gagtttgatgattatctaattctgagttttgatagcgatacacatgttctgttgattaat
ggcgaagagttagaagacacacagataacaggtttcgtagttgatggcgcaaccctttgg
gcaggctgtctattccaaagtacaacaattttgcaagtaacacatggagaagtaattctt
atcgatggtgataatattcaaatatggaaagcttccaaatggatcacgcttgttgctgtc
aatgaaataactggtcagttggtgatagcctgtggagctcttctgatatatctggaagca
gattctgctggttttaaattaatcagcgaattggaatgcgaatttgaaatttcttgtatt
gacatcactcctattggaaacgaaacactacgttccgaaatttgtgctgttggctattgg
actgatctttcggttgcgttacgtactttgcctcagttgatggaagtagttcgggaaaaa
atacctggtgatatgctttctcggtccattatgttgagtccgatggaaggacacgtttat
ttgctagtggcgcttggagatggaacagtgcattattttcagattgatatgaaaactggt
gctcttctggatccaaaaaaagcaactcttgggacacagccaatacatttgcgtaaattt
cggtcccggtgttcttcagttcataatatctttgtgtgcagtgatcgtccagcagtcatt
tattcttcgaatcagaaactcttattttctaatgtaaacctcagaatggtttcgacgatg
acaccactttatgcagaagcttatccagatgctttggtactcactgacgggaattcgttg
gttatcggtagaatcgatgatatccagaaacttcacatcagaacagttccgctgggggaa
agtccttctcgaattgcctaccagccagaaacaaatacgattgctgtaactgttgaacga
ttagagtttgtggacgccatgggaaaacatcattttggccaatgtgcatcaaaaaatgca
atggaaacatcaagtagtcggctgagttccatgaggcgagagcctactccggaatgtttg
gctgaagaaatggaagtcagttcaattttgttgctggattccaatacatttgaaatatta
cattctcatgagcttgaaggcagtgaaatggcaatgtcactggcttcttgtcaactcgga
aatgatagccaaccgtacttcgttgtaggcactgcagttatcatgtctgatgaaacggaa
tccaaaatgggccgtatcatgatgtttcaagcgtcagagggcccagaacgtatgcgtttg
gtgtatgaaaaagagattaagggagccgcttattcgattcagtctatggatgggaaactg
gtagttgcagtcaatagttgtgttcggttatttgaatggactgcggacaaagaactacgg
ttggaatgttcagattttgataatgttaccgcattatatttaaagacgaagaacgactta
attttggtgggcgatttgatgcggtctctttcgcttctttcctataaatcagtggaatca
acgtttgaaaaagtggctagagatttcatgacaaattggatgtccgcttgtgagataatt
gattctgacagctttttgggtgccgaaaactcgtataacttatttacagtagtcaaggac
tcattcacagtgttcaaagaagaagggacaagattacaagaattagggttattttacctg
ggagaaatggttaatgtattctgccatggatctttaactgccacacaagttgatgtggcg
ccgctgtatcattcctcgattttgtatggtacttcagatggtggtataggagttatcgtt
caaatgccgccagtgctttacacattcctacacgacgttcagaaacgtttggctgattat
acagaaaattgtatgcgaatttcccacacacaatatagaacatttgaaacagagaaacga
agcgaggttccaaatggtttcatcgatggcgatctaatcgagagccttttggatatgggc
aaagattcggtgggacagatcgttaacggacttaaaatgccgttattgaacataccttca
tccgaaactacggaactagtggatgcaacggcagaagatgtattaaagcttgtcgaagat
ttatcaaggatacattag
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integrated database retrieval system
